3a4r
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3a4r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A4R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A4R FirstGlance]. <br> | <table><tr><td colspan='2'>[[3a4r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A4R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A4R FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a4s|3a4s]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a4s|3a4s]]</td></tr> |
- | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Nip45 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Nip45 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a4r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3a4r RCSB], [http://www.ebi.ac.uk/pdbsum/3a4r PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a4r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3a4r RCSB], [http://www.ebi.ac.uk/pdbsum/3a4r PDBsum]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/NF2IP_MOUSE NF2IP_MOUSE]] In T-helper 2 (Th2) cells, regulates the magnitude of NFAT-driven transcription of a specific subset of cytokine genes, including IL3, IL4, IL5 and IL13, but not IL2. Recruits PRMT1 to the IL4 promoter; this leads to enhancement of histone H4 'Arg-3'-methylation and facilitates subsequent histone acetylation at the IL4 locus, thus promotes robust cytokine expression. Down-regulates formation of poly-SUMO chains by UBE2I/UBC9.<ref>PMID:20133688</ref> <ref>PMID:20077568</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Line 31: | Line 33: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
- | [[Category: Arita, K | + | [[Category: Arita, K]] |
- | [[Category: Ariyoshi, M | + | [[Category: Ariyoshi, M]] |
- | [[Category: Ikeda, Y | + | [[Category: Ikeda, Y]] |
- | [[Category: Saitoh, H | + | [[Category: Saitoh, H]] |
- | [[Category: Sekiyama, N | + | [[Category: Sekiyama, N]] |
- | [[Category: Shirakawa, M | + | [[Category: Shirakawa, M]] |
- | [[Category: Tochio, H | + | [[Category: Tochio, H]] |
[[Category: Methylation]] | [[Category: Methylation]] | ||
[[Category: Nucleus]] | [[Category: Nucleus]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Ubiquitin fold]] | [[Category: Ubiquitin fold]] |
Revision as of 15:25, 24 December 2014
The crystal structure of SUMO-like domain 2 in Nip45
|
Categories: Mus musculus | Arita, K | Ariyoshi, M | Ikeda, Y | Saitoh, H | Sekiyama, N | Shirakawa, M | Tochio, H | Methylation | Nucleus | Transcription | Ubiquitin fold