3dhu
From Proteopedia
(Difference between revisions)
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<StructureSection load='3dhu' size='340' side='right' caption='[[3dhu]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='3dhu' size='340' side='right' caption='[[3dhu]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dhu]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3dhu]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"lactobacillus_arabinosus"_fred_et_al. "lactobacillus arabinosus" fred et al.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DHU FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">amy2, lp_0179 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 Lactobacillus | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">amy2, lp_0179 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 "Lactobacillus arabinosus" Fred et al.])</td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dhu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dhu RCSB], [http://www.ebi.ac.uk/pdbsum/3dhu PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dhu TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dhu OCA], [http://pdbe.org/3dhu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dhu RCSB], [http://www.ebi.ac.uk/pdbsum/3dhu PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dhu TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dhu ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Lactobacillus arabinosus fred et al]] | ||
[[Category: Alpha-amylase]] | [[Category: Alpha-amylase]] | ||
| - | [[Category: Lactobacillus plantarum]] | ||
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Bain, K T]] | [[Category: Bain, K T]] | ||
Revision as of 03:17, 9 February 2016
Crystal structure of an alpha-amylase from Lactobacillus plantarum
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Categories: Lactobacillus arabinosus fred et al | Alpha-amylase | Almo, S C | Bain, K T | Bonanno, J B | Burley, S K | Dickey, M | Iizuka, M | Structural genomic | Ozyurt, S | Sauder, J M | Smith, D | Wasserman, S | Glycosidase | Hydrolase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative
