This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3c3m
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1== | ==Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1== | ||
<StructureSection load='3c3m' size='340' side='right' caption='[[3c3m]], [[Resolution|resolution]] 1.70Å' scene=''> | <StructureSection load='3c3m' size='340' side='right' caption='[[3c3m]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3c3m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3c3m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Metmj Metmj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3C3M FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Memar_0295, Memar_0309 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=368407 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Memar_0295, Memar_0309 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=368407 METMJ])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3c3m RCSB], [http://www.ebi.ac.uk/pdbsum/3c3m PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3c3m TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3m OCA], [http://pdbe.org/3c3m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c3m RCSB], [http://www.ebi.ac.uk/pdbsum/3c3m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3c3m ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3c3m TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 16: | Line 17: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c3m ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 23: | Line 24: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Metmj]] |
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Burley, S K]] | [[Category: Burley, S K]] | ||
Revision as of 20:46, 11 August 2016
Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1
| |||||||||||
Categories: Metmj | Almo, S C | Burley, S K | Chang, S | Dickey, M | Groshong, C | Meyer, A J | Structural genomic | Patskovsky, Y | Ramagopal, U A | Sauder, J M | Toro, R | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Signaling protein | Unknown function
