1mdv
From Proteopedia
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|PDB= 1mdv |SIZE=350|CAPTION= <scene name='initialview01'>1mdv</scene>, resolution 2.3Å | |PDB= 1mdv |SIZE=350|CAPTION= <scene name='initialview01'>1mdv</scene>, resolution 2.3Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene> | + | |LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= CYC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=881 Desulfovibrio vulgaris]) | |GENE= CYC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=881 Desulfovibrio vulgaris]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mdv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mdv OCA], [http://www.ebi.ac.uk/pdbsum/1mdv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mdv RCSB]</span> | ||
}} | }} | ||
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[[Category: Makarov, A.]] | [[Category: Makarov, A.]] | ||
[[Category: Protasevich, I.]] | [[Category: Protasevich, I.]] | ||
| - | [[Category: HEM]] | ||
[[Category: desulfovibrio vulgaris hildenborough]] | [[Category: desulfovibrio vulgaris hildenborough]] | ||
[[Category: electron transport]] | [[Category: electron transport]] | ||
[[Category: mutant cytochrome c3]] | [[Category: mutant cytochrome c3]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:14:53 2008'' |
Revision as of 19:14, 30 March 2008
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| , resolution 2.3Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | |||||||
| Gene: | CYC (Desulfovibrio vulgaris) | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
KEY ROLE OF PHENYLALANINE 20 IN CYTOCHROME C3: STRUCTURE, STABILITY AND FUNCTION STUDIES
Overview
Aromatic residues in c-type cytochromes might have an important function in the folding and/or electron transferring properties of the molecule. In the tetraheme cytochrome c3 (Mr 13 000) from Desulfovibrio vulgaris Hildenborough, Phe20, is located between heme 1 and heme 3 with its aromatic ring close and almost parallel to the ring plane of heme 1. We replaced this residue by a nonaromatic hydrophobe residue, leucine, and analyzed the effects in terms of functional, structural, and physicochemical properties. While the F20L replacement did not have any strong effects on the heme region stability, a decrease of the thermostability of the whole molecule was observed. In the same way, the four macroscopic redox potentials were affected by the mutation as well as the flexibility of the surface loop around heme 4. The F20L replacement itself and/or this structural modification might be responsible for the loss of the intermolecular cooperativity between F20L cytochrome c3 molecules.
About this Structure
1MDV is a Single protein structure of sequence from Desulfovibrio vulgaris. Full crystallographic information is available from OCA.
Reference
Key role of phenylalanine 20 in cytochrome c3: structure, stability, and function studies., Dolla A, Arnoux P, Protasevich I, Lobachov V, Brugna M, Giudici-Orticoni MT, Haser R, Czjzek M, Makarov A, Bruschi M, Biochemistry. 1999 Jan 5;38(1):33-41. PMID:9890880
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