1mkj
From Proteopedia
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|PDB= 1mkj |SIZE=350|CAPTION= <scene name='initialview01'>1mkj</scene>, resolution 2.70Å | |PDB= 1mkj |SIZE=350|CAPTION= <scene name='initialview01'>1mkj</scene>, resolution 2.70Å | ||
|SITE= | |SITE= | ||
- | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=ADP:ADENOSINE-5 | + | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=ADP:ADENOSINE-5'-DIPHOSPHATE'>ADP</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
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[[Category: switch ii]] | [[Category: switch ii]] | ||
- | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 12:46:22 2008'' |
Revision as of 10:46, 23 March 2008
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, resolution 2.70Å | |||||||
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Ligands: | , and | ||||||
Coordinates: | save as pdb, mmCIF, xml |
Human Kinesin Motor Domain With Docked Neck Linker
Overview
Crystal structures of the molecular motor kinesin show conformational variability in a structural element called the neck linker. Conformational change in the neck linker, initiated by ATP exchange, is thought to drive the movement of kinesin along the microtubule track. We use site-specific EPR measurements to show that when microtubules are absent, the neck linker exists in equilibrium between two structural states (disordered and 'docked'). The active site nucleotide does not control the position taken by the neck linker. However, we find that sulfate can specifically bind near the nucleotide site and stabilize the docked neck linker conformation, which we confirmed by solving a new crystal structure. Comparing the crystal structures of our construct with the docked or undocked neck linker reveals how microtubule binding may activate the nucleotide-sensing mechanism of kinesin, allowing neck linker transitions to power motility.
About this Structure
1MKJ is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Two conformations in the human kinesin power stroke defined by X-ray crystallography and EPR spectroscopy., Sindelar CV, Budny MJ, Rice S, Naber N, Fletterick R, Cooke R, Nat Struct Biol. 2002 Nov;9(11):844-8. PMID:12368902
Page seeded by OCA on Sun Mar 23 12:46:22 2008
Categories: Homo sapiens | Single protein | Budny, M J. | Cooke, R. | Fletterick, R. | Naber, N. | Rice, S. | Sindelar, C V. | ADP | MG | SO4 | Atpase | Microtubule | Motor protein | Myosin | Neck linker | Relay helix | Switch ii