1q6y
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 1q6y |SIZE=350|CAPTION= <scene name='initialview01'>1q6y</scene>, resolution 1.99Å | |PDB= 1q6y |SIZE=350|CAPTION= <scene name='initialview01'>1q6y</scene>, resolution 1.99Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=COA:COENZYME+A'>COA</scene> | + | |LIGAND= <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= YFDW ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | |GENE= YFDW ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK05398 PRK05398]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1q6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q6y OCA], [http://www.ebi.ac.uk/pdbsum/1q6y PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1q6y RCSB]</span> | ||
}} | }} | ||
| Line 27: | Line 29: | ||
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]] | [[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]] | ||
[[Category: Shapiro, L.]] | [[Category: Shapiro, L.]] | ||
| - | [[Category: COA]] | ||
| - | [[Category: MPD]] | ||
[[Category: coenzyme some]] | [[Category: coenzyme some]] | ||
[[Category: intertwined dimer]] | [[Category: intertwined dimer]] | ||
| Line 37: | Line 37: | ||
[[Category: structural genomic]] | [[Category: structural genomic]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:01:38 2008'' |
Revision as of 04:01, 26 March 2008
| |||||||
| , resolution 1.99Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||
| Gene: | YFDW (Escherichia coli) | ||||||
| Domains: | PRK05398 | ||||||
| Resources: | FirstGlance, OCA, PDBsum, JenaLib, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Hypothetical protein YfdW from E. coli bound to Coenzyme A
Overview
Crystal structures are reported for free and coenzyme A (CoA) bound forms of the YfdW protein from Escherichia coli, a representative type III CoA transferase. The structures reveal a two-domain protomer with interdomain connections forming a ring-like structure with a large central hole. Two protomers associate to form a highly intertwined dimer in which the hole of each ring is filled by the partner molecule. Each protomer binds a single CoA molecule and these CoA-binding sites are distant from one another in the dimer.
About this Structure
1Q6Y is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.
Reference
Structure of Escherichia coli YfdW, a type III CoA transferase., Gogos A, Gorman J, Shapiro L, Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):507-11. Epub 2004, Feb 25. PMID:14993676
Page seeded by OCA on Wed Mar 26 06:01:38 2008
Categories: Escherichia coli | Single protein | Burley, S K. | Gogos, A. | Gorman, J. | NYSGXRC, New York Structural GenomiX Research Consortium. | Shapiro, L. | Coenzyme some | Intertwined dimer | New york structural genomix research consortium | Nysgxrc | Protein structure initiative | Psi | Structural genomic
