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3ndi
From Proteopedia
(Difference between revisions)
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==X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP== | ==X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP== | ||
<StructureSection load='3ndi' size='340' side='right' caption='[[3ndi]], [[Resolution|resolution]] 1.50Å' scene=''> | <StructureSection load='3ndi' size='340' side='right' caption='[[3ndi]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ndi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3ndi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micromonospora_chalcease"_(sic)_(foulerton_1905)_orskov_1923 "micromonospora chalcease" (sic) (foulerton 1905) orskov 1923]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NDI FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=TMP:THYMIDINE-5-PHOSPHATE'>TMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=TMP:THYMIDINE-5-PHOSPHATE'>TMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ndj|3ndj]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ndj|3ndj]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcab9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1874 Micromonospora | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcab9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1874 "Micromonospora chalcease" (sic) (Foulerton 1905) Orskov 1923])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ndi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ndi RCSB], [http://www.ebi.ac.uk/pdbsum/3ndi PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ndi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndi OCA], [http://pdbe.org/3ndi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ndi RCSB], [http://www.ebi.ac.uk/pdbsum/3ndi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ndi ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ndi ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3ndi" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Micromonospora chalcea]] | ||
[[Category: Avey, M K]] | [[Category: Avey, M K]] | ||
[[Category: Bruender, N A]] | [[Category: Bruender, N A]] | ||
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[[Category: C-3'-methyltransferase]] | [[Category: C-3'-methyltransferase]] | ||
[[Category: Kijanose]] | [[Category: Kijanose]] | ||
| + | [[Category: Micromonospora chalcea]] | ||
[[Category: S-adenosylmethionine]] | [[Category: S-adenosylmethionine]] | ||
[[Category: Sugar methylation]] | [[Category: Sugar methylation]] | ||
Revision as of 04:24, 5 August 2016
X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP
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