Ribonuclease
From Proteopedia
(Difference between revisions)
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**[[3iel]] - TtRNase + nucleotide<br /> | **[[3iel]] - TtRNase + nucleotide<br /> | ||
}} | }} | ||
| - | |||
| - | *RNase I | ||
| - | |||
| - | **[[3mwq]], [[3mwq]], [[3mx8]], [[3i67]], [[3i6f]], [[3i6h]], [[3i6j]], [[3i7w]], [[3eux]], [[3euy]], [[3euz]], [[3ev0]], [[3ev1]], [[3ev2]], [[3ev3]], [[3ev4]], [[3ev5]], [[3ev6]], [[3dh5]], [[2e3w]], [[2g4w]], [[2g4x]], [[2gbq]], [[2blp]], [[2blz]], [[1jvt]], [[1jvv]], [[1js0]], [[1fs3]], [[1kf2]], [[1kf3]], [[1kf4]], [[1kf5]], [[1kf7]], [[1kf8]], [[1aqp]], [[1a2w]], [[1rnw]], [[1rnz]], [[1rno]], [[1rnq]], [[1rbx]], [[1ssc]], [[3srn]], [[4srn]], [[1srn]], [[5rsa]], [[1afu]], [[1bel]], [[1c0b]], [[1c0c]], [[1lsq]], [[1rat]], [[1rbn]], [[1rha]], [[1rhb]], [[1rnx]], [[1rny]], [[1rsm]], [[1xps]], [[1xpt]], [[2g8q]], [[2rat]], [[3mzq]], [[3mzr]], [[3rat]], [[3rn3]], [[4rat]], [[5rat]], [[6rat]], [[7rat]], [[7rsa]], [[8rat]], [[8rsa]], [[9rat]], [[9rsa]], [[3mwr]], [[4ao1]]- bRNase I pancreatic - bovine
<br /> | ||
| - | **[[3a1r]] - bRNase I pancreatic - neutron
<br /> | ||
| - | **[[3i7x]], [[3i7y]], [[3fkz]], [[3fl3]], [[3dh6]], [[3di7]], [[3di8]], [[3di9]], [[3dib]], [[3dic]], [[2oqf]], [[3bcm]], [[3bco]], [[3bcp]], [[2nui]], [[2op2]], [[1ymn]], [[1ymr]], [[1ymw]], [[2apq]], [[1izp]], [[1izq]], [[1izr]], [[1kh8]], [[1c8w]], [[1eic]], [[1eid]], [[1eie]], [[1dy5]], [[3rsd]], [[3rsk]], [[1ssa]], [[1ssb]],[[1a5p]], [[1a5q]], [[1c9v]], [[1c9x]], [[3rsp]], [[4rsd]], [[3ql1]], [[3ql2]], [[3rh1]], [[3rid]] - bRNase I pancreatic (mutant)
<br /> | ||
| - | **[[3lxo]], [[3jw1]], [[3djo]], [[3djp]], [[3djq]], [[3djv]], [[3djx]], [[3dxg]], [[3dxh]], [[2w5g]], [[2w5i]], [[2w5k]], [[2w5l]], [[2w5m]], [[3d6o]], [[3d6p]], [[3d6q]], [[3d7b]], [[3d8y]], [[3d8z]], [[2qca]], [[2g8r]], [[1z6d]], [[1z6s]], [[1u1b]], [[1w4o]], [[1w4p]], [[1w4q]], [[1wbu]], [[1o0f]], [[1jn4]], [[1jvu]], [[1f0v]], [[1ruv]], [[1rnm]], [[1rnn]], [[1rbw]], [[1rca]], [[1rpf]], [[1rpg]], [[1rph]], [[1rbw]], [[1rca]], [[1rpf]], [[1rpg]], [[1rph]], [[1rnc]], [[1rnd]], [[1rob]], [[1rta]], [[1rtb]],[[1afk]], [[1afl]], [[1eos]], [[1eow]], [[1o0h]], [[1o0m]], [[1o0n]], [[1o0o]], [[1qhc]], [[1rcn]]- bRNase I pancreatic + nucleotide<br /> | ||
| - | **[[6rsa]] - bRNase I pancreatic + nucleotide - neutron
<br /> | ||
| - | **[[3fl0]], [[3fl1]], [[4rsk]] - bRNase I pancreatic (mutant) + nucleotide<br />
| ||
| - | **[[2xog]], [[2xoi]], [[2q4g]], [[1dfj]], [[4g8v]], [[4g8y]], [[4g90]] - bRNase I pancreatic + inhibitor
<br /> | ||
| - | **[[1rar]], [[1ras]] - bRNase I pancreatic fluorescent
| ||
| - | **[[2p42]], [[2p43]], [[2p44]], [[2p45 ]], [[2p46]], [[2p47]], [[2p48]], [[2p49]], [[2p4a]], [[1bzq]], [[3qsk]] - bRNase I + antibody<br /> | ||
| - | **[[3f8g]], [[2e0j]], [[2e0l]], [[2e0m]], [[2e0o]], [[1h8x]], [[1e21]], [[1dza]] - hRNase I pancreatic (mutant) - human
<br /> | ||
| - | **[[2k11]] - hRNase I pancreatic - NMR<br />
| ||
| - | **[[1z7x]] - hRNase I + inhibitor
<br /> | ||
| - | **[[3ljd]], [[3ln8]], [[2vq8]], [[2vq9]] - ZeRNase I – Zebra fish<br /> | ||
| - | **[[2pqx]], [[2pqy]] - EcRNase I
- ''Escherichia coli''<br /> | ||
| - | **[[2z70]], [[2ea1]] - EcRNase I + DNA<BR />
| ||
| - | **[[3tsr]] – mRNase I + inhibitor | ||
| - | |||
| - | *
RNase II | ||
| - | |||
| - | **[[2ix0]], [[2id0]] - EcRNase II
<br /> | ||
| - | **[[2ix1]] - EcRNase II (mutant)
<br /> | ||
| - | **[[1m58]], [[1km8]], [[1km9]]- BuRNase 2 - Bullfrog
| ||
| - | **[[1bc4]] - BuRNase 2 - NMR<BR />
| ||
| - | **[[1m07]] - BuRNase 2 + DNA<BR />
| ||
| - | **[[2bex]] - hRNase 2 + RNase inhibitor protein<br /> | ||
| - | **[[2bzz]], [[2c01]], [[2c02]], [[2c05]] - hRNase 2 + inhibitor | ||
| - | |||
| - | *RNase III | ||
| - | |||
| - | **[[2nue]], [[2nuf]], [[2nug]], [[1yyk]], [[1yyw]], [[4m2z]], [[4m30]] - AaRNase III + RNA - ''Aquifex aeolicus''<br /> | ||
| - | **[[2ez6]], [[1yyo]], [[1yz9]], [[1rc7]] - AaRNase III (mutant) + RNA
<br /> | ||
| - | **[[1rc5]], [[1i4s]], [[1jfz]] - AaRNase III N-terminal
<br /> | ||
| - | **[[1z5f]] - BuRNase III <br /> | ||
| - | **[[2a11]] - MtRNase III - ''Mycobacterium tuberculosis''<br /> | ||
| - | **[[1o0w]] - TmRNase III - ''Thermotoga maritima''<br />
| ||
| - | **[[1t4n]], [[1t4o]] - yRNase III – yeast - NMR<BR /> | ||
| - | **[[2lbs]] - yRNase III RNA-binding domain + RNA – NMR<br /> | ||
| - | **[[2lup]], [[4oog]] - yRNase III RNA-binding domain + RNA<br /> | ||
| - | **[[2luq]] - yRNase III RNA-binding domain<br /> | ||
| - | **[[2kb5]] - hRNase 3 - NMR<BR />
| ||
| - | **[[1dyt]], [[1qmt]] - hRNase 3
<br /> | ||
| - | **[[1h1h]] - hRNase 3 + nucleotide<br />
| ||
| - | **[[2khx]] – hRNase III<br /> | ||
| - | **[[3n3w]], [[3o2r]] - RNase III nuclease domain – ''Campylobacter jejuni'' | ||
| - | |||
| - | *RNase 4 | ||
| - | |||
| - | **[[1wdy]] - hRNase 4
<br /> | ||
| - | **[[2rnf]], [[1rnf]] - hRNase 4 + nucleotide<br />
| ||
| - | **[[1kvz]] - BuRNase 4 - NMR | ||
| - | |||
| - | *RNase 5 | ||
| - | |||
| - | **[[1un3]], [[1un4]], [[1un5]], [[1gv7]], [[1b1e]], [[1b1j]], [[1k59]], [[1k5a]], [[1k5b]] - hRNase 5 (mutant)
<br /> | ||
| - | **[[1ang]], [[1b1i]], [[2ang]] - hRNase 5 <br /> | ||
| - | **[[1awz]] - hRNase 5 - NMR <br /> | ||
| - | **[[1a4y]] - hRNase 5 + RNAse inhibitor<br /> | ||
| - | **[[1agi]] - bRNase 5<br /> | ||
| - | **[[1h53]], [[1hby]] - hRNase 5 + phosphate derivative<br /> | ||
| - | **[[1gio]] - bRNase 5 - NMR <br /> | ||
| - | **[[1h53]] - hRNase 5 + PO4<br / > | ||
| - | **[[1h0d]] - hRNase 5 + antibody<br /> | ||
| - | **[[3lje]] - ZeRNase 5<br /> | ||
| - | **[[2bwk]] - mRNase 5 + sulfate - mouse <br /> | ||
| - | **[[2bwl]] - mRNase 5 + phosphate<br /> | ||
| - | **[[2j4t]] - mRNase 5 | ||
| - | |||
| - | *RNase 6 | ||
| - | |||
| - | **[[1oj1]], [[1oj8]] – BuRNase + nucleotide | ||
| - | |||
| - | *RNase 7 | ||
| - | |||
| - | **[[2hky]] - hRNase 7 - NMR | ||
| - | |||
| - | *RNase A | ||
| - | |||
| - | **[[1rra]] - RNase A (mutant) – rat<br /> | ||
| - | **[[4j5z]], [[4j60]], [[4j61]], [[4j62]], [[4j63]], [[4j64]], [[4j65]], [[4j66]], [[4j67]], [[4j68]], [[4j69]], [[4j6a]], [[4mxf]], [[1rta]] - bRNase A <br /> | ||
| - | **[[4k7m]] - bRNase A (mutant)br /> | ||
| - | **[[2aas]] - bRNase A – NMR<br /> | ||
| - | **[[4kxh]] – hRNase A<br /> | ||
| - | **[[2e33]] – bRNase A + F-box only protein 2<br /> | ||
| - | **[[4l55]] – bRNase A + aziru | ||
| - | |||
| - | *RNase B | ||
| - | |||
| - | **[[1rbb]] – bRNase B<br /> | ||
| - | **[[1rbj]] - bRNase B + tetranucleotide | ||
| - | |||
| - | *RNase BA | ||
| - | |||
| - | **[[1x1u]], [[1x1x]], [[1x1y]], [[1b27]], [[1b2u]], [[1b3s]], [[1x1w]] - BaRNase BA + Barstar (mutant) - ''Bacillus amyloliquefaciens
''<br /> | ||
| - | **[[3da7]], [[1brs]], [[1bgs]] - BaRNase BA + Barstar<br />
| ||
| - | **[[1b2s]], [[2za4]] - BaRNase BA (mutant) + Barstar (mutant) <br /> | ||
| - | **[[1brn]], [[2kf5]], [[2kf6]], [[1rnb]] - BaRNase BA + nucleotide<br /> | ||
| - | **[[3kch]], [[2f4y]], [[2f56]], [[2f5m]], [[2f5w]] - BaRNase BA crosslinked
<br /> | ||
| - | **[[2kf3]], [[2kf4]], [[1fw7]], [[1bnr]] - BaRNase BA – NMR<BR /> | ||
| - | **[[1yvs]], [[1b2x]], [[1a2p]], [[1bni]], [[1bnj]] - BaRNase BA
<br /> | ||
| - | **[[1b20]], [[1b21]], [[1b2z]], [[1bne]], [[1bnf]], [[1bng]], [[1brh]], [[1bri]], [[1brj]], [[1brk]], [[1bns]], [[1brg]], [[1bsa]], [[1bsb]], [[1bsc]], [[1bsd]], [[1bse]], [[1ban]], [[1bao]] - BaRNase BA (mutant)
| ||
| - | |||
| - | *RNase D | ||
| - | |||
| - | **[[1yt3]] - EcRNase D
| ||
| - | |||
| - | *RNase E | ||
| - | |||
| - | **[[2vmk]], [[2c4r]], [[2bx2]] - EcRNase E catalytic domain<br /> | ||
| - | **[[1slj]] - EcRNase E S1 domain - NMR<BR />
| ||
| - | **[[1smx]], [[1sn8]] - EcRNase E S1 domain
<br /> | ||
| - | **[[2vrt]], [[2c0b]] - EcRNase E catalytic domain + RNA<br /> | ||
| - | **[[3h8a]] – EcRNase E recognition domain + enolase | ||
| - | |||
| - | *RNase F1 | ||
| - | |||
| - | **[[1fus]], [[1fut]] – GfRNase F1 + nucleotide – ''Gibberella fujikuroi''<br /> | ||
| - | **[[1rck]], [[1rcl]] - GfRNase F1 - NMR | ||
| - | |||
| - | *RNase H | ||
| - | |||
| - | **[[3h7i]], [[3h8s]], [[3h8w]] - T4RNase H (mutant) - Enterobacteria phage T4
<br /> | ||
| - | **[[2ihn]] - T4RNase H (mutant) + DNA<BR />
| ||
| - | **[[3h8j]], [[1tfr]]- T4RNase H<br />
| ||
| - | **[[4e89]] – Rnase H – XMRV<br /> | ||
| - | **[[2rpi]], [[1ril]] - TtRNase H - ''Thermus thermophilus'' - NMR<BR />
| ||
| - | **[[1rbr]], [[1rbs]], [[1rbt]], [[1rbu]], [[1rbv]], [[2rn2]] - EcRNase H<br /> | ||
| - | **[[1lav]], [[1law]], [[1rda]], [[1rdb]], [[1rdc]] - EcRNase H (mutant)<br /> | ||
| - | **[[1jl2]] - EcRNase H /TtRNase H<br />
| ||
| - | **[[3d0p]], [[3ey1]], [[3i8d]] - BhRNase H (mutant) + DNA - ''Bacillus halodurans''
<br /> | ||
| - | **[[1zbf]] - BhRNase H (mutant)<br />
| ||
| - | **[[2r7y]], [[2g8f]], [[2g8h]], [[2g8i]], [[2g8k]], [[2g8u]], [[2g8v]], [[2g8w]], [[1zbi]], [[1zbl]], [[3twh]], [[3uld]] - BhRNase H (mutant) + RNA + DNA<BR />
| ||
| - | **[[4htu]], [[4hue]], [[4huf]], [[4hug]] - BhRNase H (mutant) + DNA<br /> | ||
| - | **[[4ibn]] – uRNase H – uncultured<br /> | ||
| - | **[[4h8k]] – uRNase H + RNA + DNA | ||
| - | |||
| - | *RNase HI | ||
| - | |||
| - | **[[2qk9]], [[2qkb]], [[2qkk]] - hRNase HI (mutant) + RNA + DNA<BR />
| ||
| - | **[[3h08]] - RNase HI - ''Chlorobaculum tepidum''<br /> | ||
| - | **[[3aa2]], [[3aa3]], [[3aa4]], [[3aa5]], [[2yv0]], [[2z1g]], [[2z1h]], [[2z1i]], [[2z1j]], [[1wse]], [[1wsf]], [[1wsg]], [[1wsh]], [[1wsi]], [[1wsj]], [[1jxb]], [[1jl1]], [[1f21]], [[1kva]], [[1kvb]], [[1kvc]], [[1goa]], [[1gob]], [[1goc]] - EcRNase HI (mutant)<br />
| ||
| - | **[[1g15]], [[1rdd]], [[1rnh]] - EcRNase HI
<br /> | ||
| - | **[[1rch]] - EcRNase HI - NMR<BR />
| ||
| - | **[[2zqb]] - SoRNase HI (mutant) - ''Shewanella oneidensis''<br /> | ||
| - | **[[2e4l]] - SoRNase HI<br />
| ||
| - | **[[3bsu]] - hRNase HI catalytic domain + RNA + DNA<BR />
| ||
| - | **[[2ehg]] - RNase HI - ''Sulfolobus tokodaii''<br />
| ||
| - | **[[1qhk]] - yRNase HI N-terminal – NMR<BR /> | ||
| - | **[[3u3g]] – RNase HI – uncultured organism<br /> | ||
| - | **[[4e19]], [[4nyn]] – RNase HI – ''Halobacterium salinarium'' | ||
| - | |||
| - | *RNase HII | ||
| - | |||
| - | **[[3p83]] - AfRNase HII + DNA polymerase sliding clamp - ''Archaeoglobus fulgidus''
<br /> | ||
| - | **[[1i39]], [[1i3a]] - AfRNAse HII
<br /> | ||
| - | **[[3puf]], [[3p56]], [[3p5j]] - hRNAse H2 subunits α+β+γ
<br /> | ||
| - | **[[3kio]] - mRNase H2 subunits α+β+γ
- mouse
<br /> | ||
| - | **[[3o3g]] - TmRNase HII + DNA<BR />
| ||
| - | **[[3o3f]], [[3o3h]], [[4hht]] - TmRNase HII (mutant) + DNA<BR /> | ||
| - | **[[2etj]] - TmRNase HII
<br /> | ||
| - | **[[1x1p]], [[1io2]] - TkRNase HII
<br /> | ||
| - | **[[2dfe]], [[2dff]], [[2dfh]] - TkRNase HII (mutant) - ''Thermococcus kodakarensis
''<br /> | ||
| - | **[[1eke]] - RNase HII - ''Methanocalcococcus jannaschii
'' | ||
| - | |||
| - | *RNase HIII | ||
| - | |||
| - | **[[2d0a]], [[2d0b]], [[2d0c]] - GsRNase HIII - ''Geobacillus stearothermophilus''
<br /> | ||
| - | **[[3asm]] - GsRNase HIII (mutant)<br /> | ||
| - | **[[1uax]] - PhRNase HIII – ''Pyrococcus horikoshii''<br /> | ||
| - | **[[3vn5]] - AaRNase HIII | ||
| - | |||
| - | *RNase J | ||
| - | |||
| - | **[[3bk1]] - TtRNase J
<br /> | ||
| - | **[[3bk2]] - TtRNase J + nucleotide<br /> | ||
| - | **[[3zq4]] - BsRNase J1- ''Bacillus subtilis'' | ||
| - | |||
| - | *RNase L | ||
| - | |||
| - | **[[4o1o]] - pRNase L + oligoadenylate + CMP – pig<br /> | ||
| - | **[[4o1p]] - pRNase L + oligoadenylate + AMPPNP <br /> | ||
| - | **[[4oav]] - hRNase L + oligoadenylate + AMPPCP + RNA | ||
| - | |||
| - | *RNase LE | ||
| - | |||
| - | **[[1dix]] - RNase LE - tomato | ||
| - | |||
| - | *RNase MAR1 | ||
| - | |||
| - | **[[1xn4]] - RNase MAR1 – ''Leishmania major''<br /> | ||
| - | **[[2b34]] - RNase MAR1 – ''Caenorhabditis elegans'' | ||
| - | |||
| - | *RNase MS | ||
| - | |||
| - | **[[1rms]], [[1rds]] - RNase MS + nucleotide - ''Aspergillus phoenicis'' | ||
| - | |||
| - | *RNase MC1 | ||
| - | |||
| - | **[[1v9h]], [[1j1f]], [[1j1g]] - McRNase MC1 (mutant) + nucleotide - ''Momordica charantia''
<br /> | ||
| - | **[[1ucg]] - McRNase MC1 (mutant)<br /> | ||
| - | **[[1ucd]], [[1uca]], [[1ucc]] - McRNase MC1 + nucleotide<br /> | ||
| - | **[[1bk7]] - McRNase MC1
| ||
| - | |||
| - | *RNase NT | ||
| - | |||
| - | **[[1vcz]], [[1vd1]], [[1vd3]] - toRNase NT + nucleotide - tobacco
<br /> | ||
| - | **[[1iyb]] - toRNase NW | ||
| - | |||
| - | *RNase P | ||
| - | |||
| - | **[[3ok7]], [[3okb]], [[3q1q]], [[3q1r]] - TmRNase P + TmRNase P RNA + tRNA Phe
<br /> | ||
| - | **[[1nz0]] - TmRNase P
<br /> | ||
| - | **[[1d6t]] - RNase P - ''Staphylococcus aureus'' <br /> | ||
| - | **[[2a64]] - BsRNase P (mutant) - ''Bacillus stearothermophilus
''<br /> | ||
| - | **[[1a6f]], [[1nbs]], [[2jg4]] - BsRNase P (mutant) <br /> | ||
| - | **[[1ts9]], [[1tsf]] – AfRNase P<br /> | ||
| - | **[[1u9s]] – RNase P – synthetic<br /> | ||
| - | **[[2avs]] - PfRNase P (mutant) – ''Pyrococcus furiosus''<br /> | ||
| - | **[[2k3r]], [[2ki7]] - PfRNase P<br /> | ||
| - | **[[2ljp]] – EcRNase P<br /> | ||
| - | **[[2av5]] - PhRNase P component 2<br /> | ||
| - | **[[1x0t]] - PhRNase P component 4<br /> | ||
| - | **[[2zae]] - PhRNase P component 1 and 4<br /> | ||
| - | **[[2czv]] - PhRNase P component 2 (mutant) and 3<br /> | ||
| - | **[[2cvz]], [[2zae]] – PhRNase P<br /> | ||
| - | **[[3iab]] – yRNase P subunits POP6 POP7 + RNase MRP P3 domain | ||
| - | |||
| - | *RNase PH | ||
| - | |||
| - | **[[3dd6]] - RNase PH - ''Bacillus anthracis
'' <br /> | ||
| - | **[[1oyp]], [[1oyr]], [[1oys]] - BsRNase PH
<br /> | ||
| - | **[[1r6l]], [[1r6m]] - PaRNase PH - ''Pseudomonas aeruginosa
'' <br /> | ||
| - | **[[3b4t]] - MtRNase PH - ''Mycobacterium tuberculosis''
<br /> | ||
| - | **[[1udn]] - AaRNase PH
<br /> | ||
| - | **[[1udo]], [[1udq]], [[1uds]] - AaRNase PH (mutant)
| ||
| - | |||
| - | *RNase RH | ||
| - | |||
| - | **[[1bol]] – ''Rhizopus niveus'' | ||
| - | |||
| - | *RNase S | ||
| - | |||
| - | **[[3oqy]], [[3oqz]], [[3or0]], [[1z3l]], [[1z3m]], [[1z3p]], [[1y92]], [[1y94]], [[1fev]], [[1d5d]], [[1d5e]], [[1d5h]], [[2rln]], [[1qwq]], [[4n4c]] - bRNase S seminal (mutant)
<br /> | ||
| - | **[[1tq9]], [[1r5c]], [[11ba]], [[11bg]] - bRNase S + nucleotide<br />
| ||
| - | **[[1r5d]], [[1r3m]], [[1n1x]], [[1n3z]], [[1j7z]], [[1j80]], [[1j81]], [[1j82]], [[1cjq]], [[1cjr]], [[1bsr]],[[1rbc]], [[1rbd]], [[1rbe]], [[1rbf]], [[1rbg]], [[1rbh]], [[1rbi]], [[1rnu]], [[1rnv]], [[2rns]] - bRNase S
<br /> | ||
| - | **[[1b6v]] - bRNase S/bRNase A | ||
| - | |||
| - | *RNase S3 | ||
| - | |||
| - | **[[1iqq]] - RNase S3 - Japanese pear | ||
| - | |||
| - | *RNase SA | ||
| - | |||
| - | **[[3a5e]], [[1zgx]], [[1ynv]], [[1t2h]], [[1t2i]], [[1uci]], [[1ucj]], [[1uck]], [[1ucl]], [[1i70]], [[1i8v]], [[1box]], [[4gho]] - SaRNase SA guanyl-specific (mutant) - ''Streptomyces aureofaciens
'' <br /> | ||
| - | **[[1lni]],[[1c54]], [[1rge]], [[1rgf]], [[1rgg]], [[1rgh]], [[1sar]] - SaRNase SA <br /> | ||
| - | **[[1gmp]], [[1gmq]], [[1gmr]], [[2sar]] - SaRNase SA +nucleotide<br />
| ||
| - | **[[1ay7]] - SaRNase SA + Barstar<br /> | ||
| - | **[[1rsn]] - SaRNase SA + cyclophosphothiolate | ||
| - | |||
| - | *RNase SA2 | ||
| - | |||
| - | **[[1py3]], [[1pyl]] - SaRNase SA2<br /> | ||
| - | **[[3dgy]], [[3dh2]], [[3d4a]], [[3d5g]], [[3d5i]] - SaRNase SA2 + mononucleotide | ||
| - | |||
| - | *RNase SA3 | ||
| - | |||
| - | **[[1mgr]], [[1mgw]] - SaRNase SA3 | ||
| - | |||
| - | *RNase SF11 | ||
| - | |||
| - | **[[1ioo]] - RNase SF11 - ''Nicotiana alata''
| ||
| - | |||
| - | *RNase T | ||
| - | |||
| - | **[[2is3]] - EcRNase T
<br /> | ||
| - | **[[2f96]] - PaRNase T<br /> | ||
| - | **[[3ngy]] – EcRNase T (mutant) + His tag<br /> | ||
| - | **[[3ngz]] - EcRNase T (mutant) + nucleotide<br /> | ||
| - | **[[3nh0]], [[3nh1]], [[3nh2]] - EcRNase T + nucleotide<br /> | ||
| - | **[[3v9s]], [[3v9u]], [[3v9w]], [[3v9x]], [[3v9z]], [[3va0]], [[3va3]], [[4kaz]], [[4kb0]], [[4kb1]] - EcRNase T + DNA | ||
| - | |||
| - | *RNase T1 | ||
| - | |||
| - | **[[1tto]],[[1rn1]], [[1rn4]], [[1rnt]], [[2aad]], [[2aae]] - AoRNase T1 - ''Aspergillus oryzae''
<br /> | ||
| - | **[[1q9e]], [[1iyy]], [[1i2e]], [[1i2f]], [[1i2g]], [[1i3f]], [[1i3i]], [[1hz1]], [[1fys]], [[1fzu]], [[1ch0]], [[4bir]], [[3bir]], [[5bir]],[[1g02]], [[1hyf]], [[1trp]], [[1trq]], [[2bir]], [[4rnt]], [[5rnt]], [[6rnt]], [[7rnt ]], [[8rnt]], [[9rnt]] - AoRNase T1 (mutant)<br /> | ||
| - | **[[1lov]], [[1low]], [[1loy]], [[1i0v]], [[1i0x]], [[1b2m]], [[1rhl]], [[1bir]], [[1rgk]], [[1rgl]] - AoRNase T1 (mutant) + nucleotide<br /> | ||
| - | **[[1bvi]], [[2bu4]], [[2hoh]], [[4hoh]], [[5hoh]], [[3hoh]], [[2gsp]], [[3gsp]], [[4gsp]], [[5gsp]], [[6gsp]], [[7gsp]], [[1gsp]], [[1det]], [[1rls]], [[1lra]], [[1rga]],[[1bu4]], [[1rgc]], [[2rnt]], [[3bu4]], [[4bu4]], [[5bu4]], [[3syu]], [[3urp]] - AoRNase T1 + nucleotide<br />
| ||
| - | **[[3rnt]] - AoRNase T1 + V<br /> | ||
| - | **[[1ygw]] - AoRNase T1 – NMR | ||
| - | |||
| - | *RNase T2 | ||
| - | |||
| - | **[[3t0o]] – hRNase T2 | ||
| - | |||
| - | *RNase U2 | ||
| - | |||
| - | **[[3agn]], [[3ago]], [[3ahw]] - UsRNase U2 + AMP - ''Ustilago sphaerogena
'' <br /> | ||
| - | **[[1rtu]] - UsRNase U2 | ||
| - | |||
| - | *RNase U2B | ||
| - | |||
| - | **[[3ahs]] - UsRNase U2B | ||
| - | |||
| - | *RNase Z | ||
| - | |||
| - | **[[2e7y]] - TmRNase Z<br /> | ||
| - | **[[2fk6]], [[4gcw]] - BsRNase Z (mutant) + tRNA Thr<br />
| ||
| - | **[[1y44]] - BsRNase Z (mutant)<br /> | ||
| - | **[[2cbn]] – EcRNase Z<br /> | ||
| - | **[[3v32]], [[3v33]], [[3v34]] – hRNase Z | ||
| - | |||
| - | *α-sarcin | ||
| - | |||
| - | **[[1de3]] - αsRNase – ''Aspergillus giganteus''<br /> | ||
| - | **[[1r4y]] - αsRNase (mutant) | ||
| - | |||
| - | *Oligoribonuclease | ||
| - | |||
| - | **[[2igi]], [[1yta]] – EcORNase<br /> | ||
| - | **[[2gbz]] - ORNase - ''Xanthomonas campestris'' <br /> | ||
| - | **[[1j9a]] - ORNase - ''Haemophilus influenzae''<br /> | ||
| - | **[[3tr8]] – ORNase – ''Coxiella burnetii'' | ||
| - | |||
| - | *Polynucleotide Phosphorylase | ||
| - | |||
| - | **[[3cdi]] - EcPNPase<br /> | ||
| - | **[[3gll]] - EcPNPase core<br /> | ||
| - | **[[3cdj]] - EcPNPase C-terminal truncated<br /> | ||
| - | **[[1e3h]], [[1e3p]] - PNPase - ''Streptomyces antibioticus''<br /> | ||
| - | **[[3gcm]], [[3gme]], [[3h1c]] - EcPNPase + RNase E recognition domain<br /> | ||
| - | **[[3h36]] - PNPase fragment - ''Streptococcus mutans'' | ||
| - | |||
| - | *Binase | ||
| - | |||
| - | **[[1gou]], [[1gov]], [[1goy]] – BiBinase – ''Bacillus intermedius''<br /> | ||
| - | **[[2rbi]], [[4haa]] – BiBinase (mutant)<br /> | ||
| - | **[[1buj]] – BiBinase – NMR | ||
| - | |||
| - | *Poly(A)-specific RNase | ||
| - | |||
| - | **[[1ug8]] – mParn R3H domain - NMR<BR /> | ||
| - | **[[1whv]] – mParn RNA-binding domain - NMR<BR /> | ||
| - | **[[2rok]] - mParn CAP-binding domain - NMR<BR /> | ||
| - | **[[3d45]] - mParn + nucleotide<br /> | ||
| - | **[[2a1s]] - hParn<br /> | ||
| - | **[[2a1r]], [[3ctr]] – hParn + nucleotide<br /> | ||
| - | **[[2zpo]] – RNase – ''Chelonia mydas''<br /> | ||
| - | **[[3a4y]], [[3idz]], [[3ie0]], [[3ie2]] – TtRNase (mutant) – ''Thermus thermophilus''<br /> | ||
| - | **[[3iek]] - TtRNase <br /> | ||
| - | **[[3ie1]], [[3iem]] - TtRNase (mutant) + RNA<br /> | ||
| - | **[[3iel]] - TtRNase + nucleotide<br /> | ||
| - | **[[4b8a]] – yRNase pop2 + cell division cycle protein 39<br /> | ||
| - | **[[4b8c]] – yRNase pop2 + cell division cycle protein 39 + CCR4 | ||
| - | }} | ||
| - | ==References== | ||
| - | <references/> | ||
| - | [[Category:Topic Page]] | ||
| - | *Created with the participation of [[User:David S. Goodsell|David S. Goodsell]], [[User:Eric Martz|Eric Martz]], and [[User:Eran Hodis|Eran Hodis]]. | ||
Revision as of 07:57, 21 December 2014
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3D Structures of Ribonuclease
Updated on 21-December-2014
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Alexander Berchansky, Wayne Decatur, David Canner, Joel L. Sussman, Jaime Prilusky
