1saz
From Proteopedia
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|PDB= 1saz |SIZE=350|CAPTION= <scene name='initialview01'>1saz</scene>, resolution 2.50Å | |PDB= 1saz |SIZE=350|CAPTION= <scene name='initialview01'>1saz</scene>, resolution 2.50Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Butyrate_kinase Butyrate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.7 2.7.2.7] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Butyrate_kinase Butyrate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.7 2.7.2.7] </span> |
|GENE= BUK2, TM1756 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima]) | |GENE= BUK2, TM1756 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1g99|1G99]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1saz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1saz OCA], [http://www.ebi.ac.uk/pdbsum/1saz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1saz RCSB]</span> | ||
}} | }} | ||
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[[Category: Hasson, M S.]] | [[Category: Hasson, M S.]] | ||
[[Category: Sanders, D A.]] | [[Category: Sanders, D A.]] | ||
| - | [[Category: ACP]] | ||
| - | [[Category: FMT]] | ||
| - | [[Category: NA]] | ||
[[Category: acetate kinase]] | [[Category: acetate kinase]] | ||
[[Category: actin) superfamily]] | [[Category: actin) superfamily]] | ||
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[[Category: two similar domain]] | [[Category: two similar domain]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:39:37 2008'' |
Revision as of 20:39, 30 March 2008
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| , resolution 2.50Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , | ||||||
| Gene: | BUK2, TM1756 (Thermotoga maritima) | ||||||
| Activity: | Butyrate kinase, with EC number 2.7.2.7 | ||||||
| Related: | 1G99
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Membership in the ASKHA Superfamily: Enzymological Properties and Crystal Structure of Butyrate Kinase 2 from Thermotoga maritima
Overview
The sitting-drop method of crystallization uses the evaporation of water to increase the concentration of the protein and precipitant in the drop. The presence of other volatile components, such as acetic acid, can have a marked impact on crystallization. A member of the ASKHA (acetate and sugar kinases/Hsc70/actin) superfamily of proteins, isobutyrate kinase (Buk2) from Thermotoga maritima, was expressed in Escherichia coli with six histidine residues added to the C-terminus. The purified protein was crystallized in a sitting drop with a well solution consisting of 1.7-3.0 M sodium formate, with the pH of the well solution alone adjusted to 4.5 with acetic acid. Diffraction data collected at 100 K show that the crystals diffract to 3.1 A and belong to space group I422, with unit-cell parameters a = b = 198.12, c = 58.93 A. Both the crystal form and the results of dynamic light-scattering studies suggest that Buk2 is an octomer, the first to be identified in the ASKHA superfamily.
About this Structure
1SAZ is a Single protein structure of sequence from Thermotoga maritima. Full crystallographic information is available from OCA.
Reference
Crystallization of butyrate kinase 2 from Thermotoga maritima mediated by vapor diffusion of acetic acid., Diao J, Cooper DR, Sanders DA, Hasson MS, Acta Crystallogr D Biol Crystallogr. 2003 Jun;59(Pt 6):1100-2. Epub 2003, May 23. PMID:12777787
Page seeded by OCA on Sun Mar 30 23:39:37 2008
Categories: Butyrate kinase | Single protein | Thermotoga maritima | Cooper, D R. | Diao, J S. | Hasson, M S. | Sanders, D A. | Acetate kinase | Actin) superfamily | Amppcp | Askha (acetate and sugar kinase | Butyrate | Disulfide bond | Enzyme mechanism | Hsc70 | Isobutyrate | Isobutyrate kinase | Two similar domain
