3dou
From Proteopedia
(Difference between revisions)
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<StructureSection load='3dou' size='340' side='right' caption='[[3dou]], [[Resolution|resolution]] 1.45Å' scene=''> | <StructureSection load='3dou' size='340' side='right' caption='[[3dou]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dou]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3dou]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_51530 Atcc 51530]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DOU FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rrmJ, TV0292, TVG0303954 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=50339 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rrmJ, TV0292, TVG0303954 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=50339 ATCC 51530])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dou FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dou OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dou RCSB], [http://www.ebi.ac.uk/pdbsum/3dou PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dou TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dou FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dou OCA], [http://pdbe.org/3dou PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dou RCSB], [http://www.ebi.ac.uk/pdbsum/3dou PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dou TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ | + | [[http://www.uniprot.org/uniprot/RLME_THEVO RLME_THEVO]] Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.[HAMAP-Rule:MF_01547] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dou ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Atcc 51530]] |
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Bain, K]] | [[Category: Bain, K]] | ||
Revision as of 14:56, 7 February 2016
Crystal structure of methyltransferase involved in cell division from thermoplasma volcanicum gss1
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Categories: Atcc 51530 | Almo, S C | Bain, K | Burley, S K | Dickey, M | Hu, S | Structural genomic | Ozyurt, S | Patskovsky, Y | Sauder, J M | Wasserman, S | Cell division | Methyltransferase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Rrna processing | Transferase
