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4r0v
From Proteopedia
(Difference between revisions)
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| - | ''' | + | ==[FeFe]-hydrogenase Oxygen Inactivation is Initiated by the Modification and Degradation of the H cluster 2Fe Subcluster== |
| + | <StructureSection load='4r0v' size='340' side='right' caption='[[4r0v]], [[Resolution|resolution]] 2.29Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4r0v]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R0V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R0V FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ARS:ARSENIC'>ARS</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lx4|3lx4]], [[3c8y|3c8y]]</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin_hydrogenase Ferredoxin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.7.2 1.12.7.2] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r0v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r0v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r0v RCSB], [http://www.ebi.ac.uk/pdbsum/4r0v PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The [FeFe]-hydrogenase catalytic site H cluster is a complex iron sulfur cluster assembly that is sensitive to oxygen (O2). The O2 sensitivity is a significant barrier for production of hydrogen as an energy source in water-splitting, oxygenic systems. Oxygen reacts directly with the H cluster, which results in rapid enzyme inactivation and eventual degradation. To investigate the progression of O2-dependent [FeFe]-hydrogenase inactivation and the process of H cluster degradation, the highly O2 sensitive [FeFe]-hydrogenase HydA1 from the green algae Chlamydomonas reinhardtii was exposed to defined concentrations of O2 while monitoring the loss of activity and accompanying changes in H cluster spectroscopic properties. The results indicate that H cluster degradation proceeds through a series of reactions, the extent of which depend on the initial enzyme reduction/oxidation state. The degradation process begins with O2 interacting and reacting with the 2Fe subcluster, leading to degradation of the 2Fe subcluster and leaving an inactive [4Fe-4S] subcluster state. This final inactive degradation product could be reactivated in vitro by incubation with 2Fe subcluster maturation machinery, specifically HydFEG, which was observed by recovery of enzyme activity. | ||
| - | + | [FeFe]-hydrogenase oxygen inactivation is initiated at the H cluster 2Fe subcluster.,Swanson KD, Ratzloff MW, Mulder DW, Artz JH, Ghose S, Hoffman A, White S, Zadvornyy OA, Broderick JB, Bothner B, King PW, Peters JW J Am Chem Soc. 2015 Jan 12. PMID:25579778<ref>PMID:25579778</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | == References == | |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Ferredoxin hydrogenase]] |
| + | [[Category: Artz, J H]] | ||
| + | [[Category: Bothner, B]] | ||
| + | [[Category: Broderick, J B]] | ||
[[Category: Ghose, S]] | [[Category: Ghose, S]] | ||
| + | [[Category: Hoffman, A]] | ||
| + | [[Category: King, P W]] | ||
| + | [[Category: Mulder, D W]] | ||
| + | [[Category: Peters, J W]] | ||
| + | [[Category: Ratzloff, M W]] | ||
| + | [[Category: Swanson, S D]] | ||
[[Category: White, S]] | [[Category: White, S]] | ||
| - | [[Category: | + | [[Category: Zadvornyy, O A]] |
| - | [[Category: | + | [[Category: Cys oxidation]] |
| - | [[Category: | + | [[Category: Cysteine-s-dioxide]] |
| - | [[Category: | + | [[Category: Fes cluster]] |
| - | [[Category: | + | [[Category: H-cluster]] |
| - | [[Category: | + | [[Category: Hyda1 monomer]] |
| - | [[Category: | + | [[Category: Oxidoreductase]] |
| + | [[Category: S-hydroxycysteine]] | ||
Revision as of 16:38, 28 January 2015
[FeFe]-hydrogenase Oxygen Inactivation is Initiated by the Modification and Degradation of the H cluster 2Fe Subcluster
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Categories: Ferredoxin hydrogenase | Artz, J H | Bothner, B | Broderick, J B | Ghose, S | Hoffman, A | King, P W | Mulder, D W | Peters, J W | Ratzloff, M W | Swanson, S D | White, S | Zadvornyy, O A | Cys oxidation | Cysteine-s-dioxide | Fes cluster | H-cluster | Hyda1 monomer | Oxidoreductase | S-hydroxycysteine
