4dvh

From Proteopedia

(Difference between revisions)

Revision as of 21:10, 4 August 2016

Crystal structure of Trypanosoma cruzi mitochondrial iron superoxide dismutase

Structural highlights

4dvh is a 2 chain structure with sequence from Trycc. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:	Tc00.1047053509775.40 (TRYCC)
Activity:	Superoxide dismutase, with EC number 1.15.1.1
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[Q4DCQ3_TRYCC] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).[RuleBase:RU000414]

Publication Abstract from PubMed

Trypanosoma cruzi, the causative agent of Chagas disease, contains exclusively iron-dependent superoxide dismutases (Fe-SODs) located in different subcellular compartments. Peroxynitrite, a key cytotoxic and oxidizing effector biomolecule, reacted with T. cruzi mitochondrial (Fe-SODA) and cytosolic (Fe-SODB) SODs with second order rate constants of 4.6+/-0.2 x 104 M-1s-1 and 4.3+/-0.4 x 104 M-1s-1 at pH 7.4 and 37 degrees C, respectively. Both isoforms are dose-dependently nitrated and inactivated by peroxynitrite. Susceptibility of T. cruzi Fe-SODA towards peroxynitrite was similar to that previously reported for E. coli Mn and Fe-SODs and mammalian Mn-SOD, whereas Fe-SODB was exceptionally resistant to oxidant-mediated inactivation. We report mass spectrometry analysis indicating that peroxynitrite-mediated inactivation of T. cruzi Fe-SODs is due to the site-specific nitration of the critical and universally conserved tyrosine-35 (Tyr35). Searching for structural differences, the crystal structure of Fe-SODA was solved at 2.2Aresolution. Structural analysis comparing both Fe-SODs isoforms reveals differences in key cysteines and tryptophan residues. Thiol alkylation of Fe-SODB cysteines made the enzyme more susceptible to peroxynitrite. In particular, Cys83 mutation (C83S, absent in Fe-SODA) increased the Fe-SODB sensitivity towards peroxynitrite. Molecular dynamics, electron paramagnetic resonance and immunospin-trapping analysis revealed that Cys83 present in Fe-SODB acts as an electron donor that repairs Tyr35 radical via intramolecular electron transfer, preventing peroxynitrite-dependent nitration and consequent inactivation of Fe-SODB. Parasites exposed to exogenous or endogenous sources of peroxynitrite resulted in nitration and inactivation of Fe-SODA but not Fe-SODB, suggesting that these enzymes play distinctive biological roles during parasite infection of mammalian cells.

Structural and molecular basis of the peroxynitrite-mediated nitration and inactivation of Trypanosoma cruzi Fe-superoxide dismutases A and B: Disparate susceptibilities due to the repair of Tyr35 radical by Cys83 in Fe-SODB through intramolecular electron transfer.,Martinez A, Peluffo G, Petruk AA, Hugo M, Pineyro D, Demicheli V, Moreno D, Lima A, Batthyany C, Duran R, Robello C, Marti MA, Larrieux N, Buschiazzo A, Trujillo M, Radi R, Piacenza L J Biol Chem. 2014 Mar 10. PMID:24616096^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Martinez A, Peluffo G, Petruk AA, Hugo M, Pineyro D, Demicheli V, Moreno D, Lima A, Batthyany C, Duran R, Robello C, Marti MA, Larrieux N, Buschiazzo A, Trujillo M, Radi R, Piacenza L. Structural and molecular basis of the peroxynitrite-mediated nitration and inactivation of Trypanosoma cruzi Fe-superoxide dismutases A and B: Disparate susceptibilities due to the repair of Tyr35 radical by Cys83 in Fe-SODB through intramolecular electron transfer. J Biol Chem. 2014 Mar 10. PMID:24616096 doi:http://dx.doi.org/10.1074/jbc.M113.545590

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 See Also
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4dvh"

@@ Line 1: / Line 1: @@
 ==Crystal structure of Trypanosoma cruzi mitochondrial iron superoxide dismutase==
 <StructureSection load='4dvh' size='340' side='right' caption='[[4dvh]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
@@ Line 6: / Line 7: @@
 <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tc00.1047053509775.40 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC])</td></tr>
 <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dvh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dvh RCSB], [http://www.ebi.ac.uk/pdbsum/4dvh PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dvh OCA], [http://pdbe.org/4dvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dvh RCSB], [http://www.ebi.ac.uk/pdbsum/4dvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dvh ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 18: / Line 19: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4dvh" style="background-color:#fffaf0;"></div>
 ==See Also==

4dvh

From Proteopedia

Revision as of 21:10, 4 August 2016

Crystal structure of Trypanosoma cruzi mitochondrial iron superoxide dismutase

Structural highlights

Function

Publication Abstract from PubMed

See Also

References

Contents

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