This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

4cbf

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 06:40, 22 April 2015

Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus

Structural highlights

4cbf is a 6 chain structure with sequence from Dengue virus 4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:	4cau
Resources:	FirstGlance, OCA, RCSB, PDBsum

Function

[E0WXI2_9FLAV] Envelope protein E binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes (By similarity).[SAAS:SAAS011998_004_099774]

Publication Abstract from PubMed

Dengue virus (DENV), a mosquito-borne virus, is responsible for millions cases of infections worldwide. There are four DENV serotypes (DENV1 - 4). After a primary DENV infection, the antibodies elicited confer lifetime protection against that DENV serotype. However, in a secondary infection with another serotype, the pre-existing antibodies may cause antibody-dependent enhancement (ADE) of infection of macrophage cells leading to the development of the more severe form of disease, dengue hemorrhagic fever. Thus a safe vaccine should stimulate protection against all dengue serotypes simultaneously. To facilitate the development of a vaccine, good knowledge of different DENV serotype structures is crucial. Structures of DENV1 and DENV2 had been solved previously. Here we present a near-atomic resolution cryo-electron microscopy (cryo-EM) structure of mature DENV4. Comparison of the DENV4 structure with similar resolution cryo-EM structures of DENV1 and DENV2 showed differences in surface charge distribution, which may explain their differences in binding to cellular receptors such as heparin. Also, observed variations in amino acid residues involved in interactions between envelope and membrane proteins on the virus surface correlate with their ability to undergo structural changes at higher temperatures.

Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus.,Kostyuchenko VA, Chew PL, Ng TS, Lok SM J Virol. 2013 Oct 23. PMID:24155405^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Kostyuchenko VA, Chew PL, Ng TS, Lok SM. Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus. J Virol. 2013 Oct 23. PMID:24155405 doi:http://dx.doi.org/10.1128/JVI.02641-13

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4cbf"

@@ Line 2: / Line 2: @@
 <StructureSection load='4cbf' size='340' side='right' caption='[[4cbf]], [[Resolution|resolution]] 4.10&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4cbf]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Dengue_virus_2 Dengue virus 2] and [http://en.wikipedia.org/wiki/Dengue_virus_4 Dengue virus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CBF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CBF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4cbf]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Dengue_virus_4 Dengue virus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CBF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CBF FirstGlance]. <br>
 </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4cau|4cau]]</td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cbf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4cbf RCSB], [http://www.ebi.ac.uk/pdbsum/4cbf PDBsum]</span></td></tr>
@@ Line 20: / Line 20: @@
 __TOC__
 </StructureSection>
-[[Category: Dengue virus 2]]
 [[Category: Dengue virus 4]]
 [[Category: Chew, P L]]

4cbf

From Proteopedia

Revision as of 06:40, 22 April 2015

Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox