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2y28
From Proteopedia
(Difference between revisions)
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==crystal structure of Se-Met AmpD derivative== | ==crystal structure of Se-Met AmpD derivative== | ||
<StructureSection load='2y28' size='340' side='right' caption='[[2y28]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2y28' size='340' side='right' caption='[[2y28]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2y28]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2y28]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_freundii"_braak_1928 "bacterium freundii" braak 1928]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y28 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Y28 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1j3g|1j3g]], [[2y2e|2y2e]], [[2y2c|2y2c]], [[2y2d|2y2d]], [[2y2b|2y2b]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1j3g|1j3g]], [[2y2e|2y2e]], [[2y2c|2y2c]], [[2y2d|2y2d]], [[2y2b|2y2b]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylmuramoyl-L-alanine_amidase N-acetylmuramoyl-L-alanine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.28 3.5.1.28] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylmuramoyl-L-alanine_amidase N-acetylmuramoyl-L-alanine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.28 3.5.1.28] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2y28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y28 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2y28 RCSB], [http://www.ebi.ac.uk/pdbsum/2y28 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2y28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y28 OCA], [http://pdbe.org/2y28 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2y28 RCSB], [http://www.ebi.ac.uk/pdbsum/2y28 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2y28 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2y28" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bacterium freundii braak 1928]] |
[[Category: N-acetylmuramoyl-L-alanine amidase]] | [[Category: N-acetylmuramoyl-L-alanine amidase]] | ||
[[Category: Andre, I]] | [[Category: Andre, I]] | ||
Revision as of 09:29, 4 August 2016
crystal structure of Se-Met AmpD derivative
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Categories: Bacterium freundii braak 1928 | N-acetylmuramoyl-L-alanine amidase | Andre, I | Barbe, S | Carrasco-Lopez, C | Hermoso, J A | Hesek, D | Lee, M | Martinez-Ripoll, M | Mobashery, S | Rojas-Altuve, A | Silva-Martin, N | Zhang, W | Activation mechanism | Amidase 2 family | Hydrolase | Peptidoglycan amidase
