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3dno
From Proteopedia
(Difference between revisions)
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==Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state== | ==Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state== | ||
<StructureSection load='3dno' size='340' side='right' caption='[[3dno]], [[Resolution|resolution]] 20.00Å' scene=''> | <StructureSection load='3dno' size='340' side='right' caption='[[3dno]], [[Resolution|resolution]] 20.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dno]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Hiv- | + | <table><tr><td colspan='2'>[[3dno]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Hiv-1 Hiv-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DNO FirstGlance]. <br> |
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gc1|1gc1]], [[3dnl|3dnl]], [[3dnn|3dnn]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gc1|1gc1]], [[3dnl|3dnl]], [[3dnn|3dnn]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">env ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11706 HIV-1 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">env ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11706 HIV-1])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dno OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dno RCSB], [http://www.ebi.ac.uk/pdbsum/3dno PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dno OCA], [http://pdbe.org/3dno PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dno RCSB], [http://www.ebi.ac.uk/pdbsum/3dno PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dno ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dno ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3dno" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Hiv-1 | + | [[Category: Hiv-1]] |
[[Category: Bartesaghi, A]] | [[Category: Bartesaghi, A]] | ||
[[Category: Borgnia, M J]] | [[Category: Borgnia, M J]] | ||
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[[Category: Fusion protein]] | [[Category: Fusion protein]] | ||
[[Category: Gp120]] | [[Category: Gp120]] | ||
| - | [[Category: Hiv-1]] | ||
[[Category: Host-virus interaction]] | [[Category: Host-virus interaction]] | ||
[[Category: Immunodeficiency virus]] | [[Category: Immunodeficiency virus]] | ||
Revision as of 04:11, 5 August 2016
Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state
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Categories: Hiv-1 | Bartesaghi, A | Borgnia, M J | Liu, J | Sapiro, G | Subramaniam, S | Aid | Apoptosis | Cleavage on pair of basic residue | Envelope glycoprotein | Envelope protein | Fusion protein | Gp120 | Host-virus interaction | Immunodeficiency virus | Lipoprotein | Membrane | Palmitate | Viral immunoevasion | Viral protein | Virion

