2ete
From Proteopedia
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|PDB= 2ete |SIZE=350|CAPTION= <scene name='initialview01'>2ete</scene>, resolution 1.75Å | |PDB= 2ete |SIZE=350|CAPTION= <scene name='initialview01'>2ete</scene>, resolution 1.75Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=GLV:GLYOXYLIC+ACID'>GLV</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Oxalate_oxidase Oxalate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.3.4 1.2.3.4] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Oxalate_oxidase Oxalate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.3.4 1.2.3.4] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1fi2|1fi2]], [[2et1|2et1]], [[2et7|2et7]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ete FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ete OCA], [http://www.ebi.ac.uk/pdbsum/2ete PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ete RCSB]</span> | ||
}} | }} | ||
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[[Category: Whittaker, M M.]] | [[Category: Whittaker, M M.]] | ||
[[Category: Woo, E J.]] | [[Category: Woo, E J.]] | ||
| - | [[Category: GLV]] | ||
| - | [[Category: MN]] | ||
| - | [[Category: NAG]] | ||
[[Category: cupin]] | [[Category: cupin]] | ||
[[Category: double stranded beta-helix]] | [[Category: double stranded beta-helix]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:53:33 2008'' |
Revision as of 23:53, 30 March 2008
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| , resolution 1.75Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||
| Activity: | Oxalate oxidase, with EC number 1.2.3.4 | ||||||
| Related: | 1fi2, 2et1, 2et7
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Recombinant oxalate oxidase in complex with glycolate
Overview
Oxalate oxidase (EC 1.2.3.4) catalyzes the conversion of oxalate and dioxygen to hydrogen peroxide and carbon dioxide. In this study, glycolate was used as a structural analogue of oxalate to investigate substrate binding in the crystalline enzyme. The observed monodentate binding of glycolate to the active site manganese ion of oxalate oxidase is consistent with a mechanism involving C-C bond cleavage driven by superoxide anion attack on a monodentate coordinated substrate. In this mechanism, the metal serves two functions: to organize the substrates (oxalate and dioxygen) and to transiently reduce dioxygen. The observed structure further implies important roles for specific active site residues (two asparagines and one glutamine) in correctly orientating the substrates and reaction intermediates for catalysis. Combined spectroscopic, biochemical, and structural analyses of mutants confirms the importance of the asparagine residues in organizing a functional active site complex.
About this Structure
2ETE is a Single protein structure of sequence from Hordeum vulgare. Full crystallographic information is available from OCA.
Reference
Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase., Opaleye O, Rose RS, Whittaker MM, Woo EJ, Whittaker JW, Pickersgill RW, J Biol Chem. 2006 Mar 10;281(10):6428-33. Epub 2005 Nov 15. PMID:16291738
Page seeded by OCA on Mon Mar 31 02:53:33 2008
