This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3bla
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Synthetic Gene Encoded DcpS bound to inhibitor DG153249== | ==Synthetic Gene Encoded DcpS bound to inhibitor DG153249== | ||
<StructureSection load='3bla' size='340' side='right' caption='[[3bla]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='3bla' size='340' side='right' caption='[[3bla]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3bla]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3bla]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BLA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BLA FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DD3:5-[(1S)-1-(3-CHLOROPHENYL)ETHOXY]QUINAZOLINE-2,4-DIAMINE'>DD3</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DD3:5-[(1S)-1-(3-CHLOROPHENYL)ETHOXY]QUINAZOLINE-2,4-DIAMINE'>DD3</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1st0|1st0]], [[1st4|1st4]], [[3bl7|3bl7]], [[3bl9|3bl9]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1st0|1st0]], [[1st4|1st4]], [[3bl7|3bl7]], [[3bl9|3bl9]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DCPS, DCS1, HINT5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DCPS, DCS1, HINT5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bla OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bla RCSB], [http://www.ebi.ac.uk/pdbsum/3bla PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bla OCA], [http://pdbe.org/3bla PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bla RCSB], [http://www.ebi.ac.uk/pdbsum/3bla PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3bla ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 18: | Line 19: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bla ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 28: | Line 29: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3bla" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Human]] |
[[Category: ATCG3D, Accelerated Technologies Center for Gene to 3D Structure]] | [[Category: ATCG3D, Accelerated Technologies Center for Gene to 3D Structure]] | ||
[[Category: Christensen, J]] | [[Category: Christensen, J]] | ||
Revision as of 17:40, 5 August 2016
Synthetic Gene Encoded DcpS bound to inhibitor DG153249
| |||||||||||
Categories: Human | ATCG3D, Accelerated Technologies Center for Gene to 3D Structure | Christensen, J | Staker, B L | Stewart, L | Accelerated technologies center for gene to 3d structure | Atcg3d | Dcp | Hydrolase | Ligand complex | Mrna decapping enzyme | Nonsense-mediated mrna decay | Nucleus | PSI, Protein structure initiative | Structural genomic

