This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3d0w
From Proteopedia
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326== | ==Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326== | ||
<StructureSection load='3d0w' size='340' side='right' caption='[[3d0w]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='3d0w' size='340' side='right' caption='[[3d0w]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d0w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3d0w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D0W FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yflH, BSU07680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yflH, BSU07680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d0w RCSB], [http://www.ebi.ac.uk/pdbsum/3d0w PDBsum], [http://www.topsan.org/Proteins/NESGC/3d0w TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0w OCA], [http://pdbe.org/3d0w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3d0w RCSB], [http://www.ebi.ac.uk/pdbsum/3d0w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0w ProSAT], [http://www.topsan.org/Proteins/NESGC/3d0w TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 15: | Line 16: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0w ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Bacillus | + | [[Category: Bacillus globigii migula 1900]] |
[[Category: Acton, T B]] | [[Category: Acton, T B]] | ||
[[Category: Baran, M C]] | [[Category: Baran, M C]] | ||
Revision as of 18:30, 5 August 2016
Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326
| |||||||||||
Categories: Bacillus globigii migula 1900 | Acton, T B | Baran, M C | Fang, Y | Forouhar, F | Hunt, J F | Kuzin, A P | Liu, J | Ma, L-C | Min, S | Montelione, G T | Structural genomic | Neely, H | Owens, L | Rost, B | Seetharaman, J | Tong, L | Xiao, R | Zhao, L | Bacillus subtili | Gram-positive bacterium | Nesg | PSI, Protein structure initiative | Unknown function | Yflh

