This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3f90
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Desulfovibrio desulfuricans (ATCC 29577) semiquinone flavodoxin== | ==Desulfovibrio desulfuricans (ATCC 29577) semiquinone flavodoxin== | ||
<StructureSection load='3f90' size='340' side='right' caption='[[3f90]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='3f90' size='340' side='right' caption='[[3f90]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3f90]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3f90]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_desulfuricans"_(beijerinck_1895)_saltet_1900 "bacillus desulfuricans" (beijerinck 1895) saltet 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F90 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F90 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">flavodoxin ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=876 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">flavodoxin ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=876 "Bacillus desulfuricans" (Beijerinck 1895) Saltet 1900])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f90 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f90 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f90 RCSB], [http://www.ebi.ac.uk/pdbsum/3f90 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f90 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f90 OCA], [http://pdbe.org/3f90 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f90 RCSB], [http://www.ebi.ac.uk/pdbsum/3f90 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f90 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 17: | Line 18: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f90 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 24: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Desulfovibrio desulfuricans]] | ||
[[Category: Guelker, M]] | [[Category: Guelker, M]] | ||
[[Category: Shamoo, Y]] | [[Category: Shamoo, Y]] | ||
Revision as of 19:48, 5 August 2016
Desulfovibrio desulfuricans (ATCC 29577) semiquinone flavodoxin
| |||||||||||

