This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

4mdu

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 07:22, 23 December 2016

Crystal structure of apo-Annexin (Sm)1

Structural highlights

4mdu is a 2 chain structure with sequence from Blood fluke. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:	4mdv
Gene:	annexin (Sm)1, Smp_074150.1 (Blood fluke)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Schistosomiasis is a major parasitic disease of humans, second only to malaria in its global impact. The disease is caused by digenean trematodes that infest the vasculature of their human hosts. These flukes are limited externally by a body wall composed of a syncytial epithelium, the apical surface membrane of which is a parasitism-adapted dual membrane complex. Annexins are thought to be of integral importance for the stability of this apical membrane system. Here, we present the first structural and immunobiochemical characterization of an annexin from Schistosoma mansoni. The crystal structure of annexin B22 confirms the presence of the previously predicted alpha-helical segment in the II/III linker and reveals a covalently linked head-to-head dimer. From the calcium-bound crystal structure of this protein, canonical type II, type III and B site positions are occupied, and a novel binding site has been identified. The dimer arrangement observed in the crystal structure suggests the presence of two prominent features, a potential non-canonical membrane binding site and a potential binding groove opposite to the former. Results from transcriptional profiling during development show that annexin B22 expression is correlated with life stages of the parasite that possess the syncytial tegument layer, and ultrastructural localization by immuno-electron microscopy confirms the occurrence of annexins in the tegument of S. mansoni. Data from membrane binding and aggregation assays indicate the presence of differential molecular mechanisms and support the hypothesis of annexin B22 providing structural integrity in the tegument. DATABASE: Coordinates and structure factors have been deposited with the PDB, accession numbers 4mdu, 4mdv STRUCTURED DIGITAL ABSTRACT: annexin B22 and annexin B22 bind by molecular sieving (View interaction) annexin B22 and annexin B22 bind by x-ray crystallography (View interaction).

Crystal structure and immunological properties of the first annexin from Schistosoma mansoni: insights into the structural integrity of the schistosomal tegument.,Leow CY, Willis C, Osman A, Mason L, Simon A, Smith BJ, Gasser RB, Jones MK, Hofmann A FEBS J. 2013 Dec 28. doi: 10.1111/febs.12700. PMID:24428567^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Leow CY, Willis C, Osman A, Mason L, Simon A, Smith BJ, Gasser RB, Jones MK, Hofmann A. Crystal structure and immunological properties of the first annexin from Schistosoma mansoni: insights into the structural integrity of the schistosomal tegument. FEBS J. 2013 Dec 28. doi: 10.1111/febs.12700. PMID:24428567 doi:http://dx.doi.org/10.1111/febs.12700

1 Structural highlights
2 Publication Abstract from PubMed
3 See Also
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4mdu"

Categories: Blood fluke | Hofmann, A | Annexin | Calcium-binding protein | Metal binding protein

@@ Line 1: / Line 1: @@
 ==Crystal structure of apo-Annexin (Sm)1==
 <StructureSection load='4mdu' size='340' side='right' caption='[[4mdu]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
@@ Line 5: / Line 6: @@
 </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4mdv|4mdv]]</td></tr>
 <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">annexin (Sm)1, Smp_074150.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6183 Blood fluke])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mdu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4mdu RCSB], [http://www.ebi.ac.uk/pdbsum/4mdu PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mdu OCA], [http://pdbe.org/4mdu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4mdu RCSB], [http://www.ebi.ac.uk/pdbsum/4mdu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4mdu ProSAT]</span></td></tr>
 </table>
 <div style="background-color:#fffaf0;">
@@ Line 15: / Line 16: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4mdu" style="background-color:#fffaf0;"></div>
 ==See Also==

4mdu

From Proteopedia

Revision as of 07:22, 23 December 2016

Crystal structure of apo-Annexin (Sm)1

Structural highlights

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox