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3cxm
From Proteopedia
(Difference between revisions)
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==Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil== | ==Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil== | ||
<StructureSection load='3cxm' size='340' side='right' caption='[[3cxm]], [[Resolution|resolution]] 1.50Å' scene=''> | <StructureSection load='3cxm' size='340' side='right' caption='[[3cxm]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3cxm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3cxm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_(viannia)_naiffi Leishmania (viannia) naiffi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CXM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CXM FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene>, <scene name='pdbligand=URB:5-BROMOPYRIMIDINE-2,4(1H,3H)-DIONE'>URB</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene>, <scene name='pdbligand=URB:5-BROMOPYRIMIDINE-2,4(1H,3H)-DIONE'>URB</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">similar to LbrM18_V2.0540 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5678 Leishmania naiffi])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">similar to LbrM18_V2.0540 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5678 Leishmania (Viannia) naiffi])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cxm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cxm RCSB], [http://www.ebi.ac.uk/pdbsum/3cxm PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cxm OCA], [http://pdbe.org/3cxm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cxm RCSB], [http://www.ebi.ac.uk/pdbsum/3cxm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cxm ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cxm ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Leishmania naiffi]] | ||
[[Category: Larson, E T]] | [[Category: Larson, E T]] | ||
[[Category: Merritt, E A]] | [[Category: Merritt, E A]] | ||
Revision as of 17:55, 11 August 2016
Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil
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Categories: Larson, E T | Merritt, E A | Structural genomic | 5-bromouracil | Base excision repair | Ber | Dna damage repair | Dna repair | Glycosidase | Glycosylase | Hydrolase | Leishmania | Msgpp | Sgpp
