2j0s
From Proteopedia
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|PDB= 2j0s |SIZE=350|CAPTION= <scene name='initialview01'>2j0s</scene>, resolution 2.21Å | |PDB= 2j0s |SIZE=350|CAPTION= <scene name='initialview01'>2j0s</scene>, resolution 2.21Å | ||
|SITE= <scene name='pdbsite=AC1:Anp+Binding+Site+For+Chain+A'>AC1</scene> | |SITE= <scene name='pdbsite=AC1:Anp+Binding+Site+For+Chain+A'>AC1</scene> | ||
| - | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | + | |LIGAND= <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=U:URIDINE-5'-MONOPHOSPHATE'>U</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j0s OCA], [http://www.ebi.ac.uk/pdbsum/2j0s PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2j0s RCSB]</span> | ||
}} | }} | ||
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[[Category: Ebert, J.]] | [[Category: Ebert, J.]] | ||
[[Category: Lorentzen, E.]] | [[Category: Lorentzen, E.]] | ||
| - | [[Category: ANP]] | ||
| - | [[Category: MG]] | ||
[[Category: acetylation]] | [[Category: acetylation]] | ||
[[Category: alternative splicing]] | [[Category: alternative splicing]] | ||
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[[Category: transport]] | [[Category: transport]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:51:27 2008'' |
Revision as of 00:51, 31 March 2008
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| , resolution 2.21Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | , , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
THE CRYSTAL STRUCTURE OF THE EXON JUNCTION COMPLEX AT 2.2 A RESOLUTION
Overview
The exon junction complex (EJC) plays a major role in posttranscriptional regulation of mRNA in metazoa. The EJC is deposited onto mRNA during splicing and is transported to the cytoplasm where it influences translation, surveillance, and localization of the spliced mRNA. The complex is formed by the association of four proteins (eIF4AIII, Barentsz [Btz], Mago, and Y14), mRNA, and ATP. The 2.2 A resolution structure of the EJC reveals how it stably locks onto mRNA. The DEAD-box protein eIF4AIII encloses an ATP molecule and provides the binding sites for six ribonucleotides. Btz wraps around eIF4AIII and stacks against the 5' nucleotide. An intertwined network of interactions anchors Mago-Y14 and Btz at the interface between the two domains of eIF4AIII, effectively stabilizing the ATP bound state. Comparison with the structure of the eIF4AIII-Btz subcomplex that we have also determined reveals that large conformational changes are required upon EJC assembly and disassembly.
About this Structure
2J0S is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.
Reference
The crystal structure of the exon junction complex reveals how it maintains a stable grip on mRNA., Bono F, Ebert J, Lorentzen E, Conti E, Cell. 2006 Aug 25;126(4):713-25. PMID:16923391
Page seeded by OCA on Mon Mar 31 03:51:27 2008
Categories: Homo sapiens | Protein complex | Bono, F. | Conti, E. | Ebert, J. | Lorentzen, E. | Acetylation | Alternative splicing | Atp-binding | Coiled coil | Dead-box helicase | Dna-binding | Ejc | Helicase | Hydrolase | Mrna processing | Mrna splicing | Mrna transport | Nonsense-mediated mrna decay | Nuclear protein | Nucleotide-binding | Phosphorylation | Rna-binding | Rrna processing | Transport
