User:Nitzan Dubovski/Prion

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===Structure of PRPsc===
===Structure of PRPsc===
The damaged form (PRPsc) is built from the same amino acids but takes a different shape, and contains mainly beta sheets. Little is known about the molecular details of this isoform, however it is wildly accepted that during the conversion of PRPc to PRPsc the β-strand content increases substantially, and this altered structure is insoluble, extremely stable, and has a resistance to denaturation by chemical and physical agents. All these features cause accumulations in infected tissues and therefore tissue damage and cell death.
The damaged form (PRPsc) is built from the same amino acids but takes a different shape, and contains mainly beta sheets. Little is known about the molecular details of this isoform, however it is wildly accepted that during the conversion of PRPc to PRPsc the β-strand content increases substantially, and this altered structure is insoluble, extremely stable, and has a resistance to denaturation by chemical and physical agents. All these features cause accumulations in infected tissues and therefore tissue damage and cell death.
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During the formation of amyloids from recombinant PRPc in vitro, a2 and a3 helices have been shown to undergo a vest structural rearrangement into a <scene name='68/684796/Prpsc/1'>cross beta-sheet architecture</scene>, which is characteristic for amyloid. The a2 and a3 helices of the PRPc are beeing converted into two discontinuous segments, that are covalently linked by a disulfide bond between <scene name='68/684796/Prpsc/2'>Cys179 and Cys214</scene>. Then, specific hydrogen bonding interactions between exposed beta strends facilities the formation of a large molecular weight aggregates.
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During the formation of amyloids from recombinant PRPc in vitro, a2 and a3 helices have been shown to undergo a vest structural rearrangement into a <scene name='68/684796/Prpsc/1'>cross beta-sheet architecture</scene>, which is characteristic for amyloid.
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The a2 and a3 helices of the PRPc are beeing converted into two discontinuous segments, that are covalently linked by a disulfide bond between <scene name='68/684796/Prpsc/2'>Cys179 and Cys214</scene>. Then, specific hydrogen bonding interactions between exposed beta strends facilities the formation of a large molecular weight aggregates.
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Recent evidence suggests a similar conformational change in this region of the protein upon conversion to the PrPsc isoform. The assembly of these fragments into the hexamer is driven by the maximization of hydrogen bonding and burial of hydrophobic sidechains.<ref>Apostol MI et al. Crystal structure of a human prion protein fragment reveals a motif for oligomer formation. 2013</ref>
Recent evidence suggests a similar conformational change in this region of the protein upon conversion to the PrPsc isoform. The assembly of these fragments into the hexamer is driven by the maximization of hydrogen bonding and burial of hydrophobic sidechains.<ref>Apostol MI et al. Crystal structure of a human prion protein fragment reveals a motif for oligomer formation. 2013</ref>

Revision as of 14:35, 19 January 2015

Prion Protein

NMR structure of normal Prion protein, residues 121-228

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Nitzan Dubovski

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