2opf
From Proteopedia
(Difference between revisions)
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|PDB= 2opf |SIZE=350|CAPTION= <scene name='initialview01'>2opf</scene>, resolution 1.85Å | |PDB= 2opf |SIZE=350|CAPTION= <scene name='initialview01'>2opf</scene>, resolution 1.85Å | ||
|SITE= <scene name='pdbsite=AC1:Ped+Binding+Site+For+Residue+C+427'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+601'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+A+701'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+C+702'>AC5</scene>, <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+703'>AC6</scene>, <scene name='pdbsite=AC7:Gol+Binding+Site+For+Residue+A+704'>AC7</scene> and <scene name='pdbsite=AC8:Gol+Binding+Site+For+Residue+A+705'>AC8</scene> | |SITE= <scene name='pdbsite=AC1:Ped+Binding+Site+For+Residue+C+427'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+601'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+A+701'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+C+702'>AC5</scene>, <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+703'>AC6</scene>, <scene name='pdbsite=AC7:Gol+Binding+Site+For+Residue+A+704'>AC7</scene> and <scene name='pdbsite=AC8:Gol+Binding+Site+For+Residue+A+705'>AC8</scene> | ||
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PED:PENTANE-3,4-DIOL-5-PHOSPHATE'>PED</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= nei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | |GENE= nei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[2ea0|2EA0]], [[2oq4|2OQ4]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2opf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2opf OCA], [http://www.ebi.ac.uk/pdbsum/2opf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2opf RCSB]</span> | ||
}} | }} | ||
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[[Category: Shoham, G.]] | [[Category: Shoham, G.]] | ||
[[Category: Zharov, D O.]] | [[Category: Zharov, D O.]] | ||
| - | [[Category: GOL]] | ||
| - | [[Category: SO4]] | ||
| - | [[Category: ZN]] | ||
[[Category: base excision]] | [[Category: base excision]] | ||
[[Category: covalent intermediate]] | [[Category: covalent intermediate]] | ||
| Line 32: | Line 32: | ||
[[Category: reaction mechanism]] | [[Category: reaction mechanism]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:21:16 2008'' |
Revision as of 01:21, 31 March 2008
| |||||||
| , resolution 1.85Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , , , and | ||||||
| Ligands: | , , , , , , , | ||||||
| Gene: | nei (Escherichia coli) | ||||||
| Related: | 2EA0, 2OQ4
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate
About this Structure
2OPF is a Protein complex structure of sequences from Escherichia coli. Full crystallographic information is available from OCA.
Page seeded by OCA on Mon Mar 31 04:21:16 2008
