This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2poo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 2poo |SIZE=350|CAPTION= <scene name='initialview01'>2poo</scene>, resolution 2.050&Aring;
|PDB= 2poo |SIZE=350|CAPTION= <scene name='initialview01'>2poo</scene>, resolution 2.050&Aring;
|SITE=
|SITE=
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM ION'>CA</scene>
+
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/3-phytase 3-phytase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.8 3.1.3.8]
+
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/3-phytase 3-phytase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.8 3.1.3.8] </span>
|GENE=
|GENE=
 +
|DOMAIN=
 +
|RELATEDENTRY=
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2poo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2poo OCA], [http://www.ebi.ac.uk/pdbsum/2poo PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2poo RCSB]</span>
}}
}}
Line 25: Line 28:
[[Category: Ha, N C.]]
[[Category: Ha, N C.]]
[[Category: Oh, B H.]]
[[Category: Oh, B H.]]
-
[[Category: CA]]
 
[[Category: calcium loaded state]]
[[Category: calcium loaded state]]
[[Category: thermostable phytase]]
[[Category: thermostable phytase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:15:41 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:38:48 2008''

Revision as of 01:38, 31 March 2008


PDB ID 2poo

Drag the structure with the mouse to rotate
, resolution 2.050Å
Ligands:
Activity: 3-phytase, with EC number 3.1.3.8
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



THERMOSTABLE PHYTASE IN FULLY CALCIUM LOADED STATE


Overview

A novel bacterial phytase from a Bacillus amyloliquefaciens strain was crystallized using the hanging-drop vapour-diffusion method. The amino-acid sequence of the enzyme does not show any homology to those of other known phytases or phosphatases, with the exception of a phytase from Bacillus subtilis. The enzyme exhibits a thermal stability which is strongly dependent on calcium ions. High-quality single crystals of the enzyme in the absence of calcium ions were obtained using a precipitant solution containing 20% 2-methyl-2, 4-pentanediol and 0.1 M MES (pH 6.5). Native diffraction data to 2.0 A resolution were obtained from a flash-frozen crystal at 110 K using a rotating-anode X-ray source. The crystals belong to space group P212121 with unit-cell dimensions a = 50.4, b = 64.1, c = 104. 2 A and contain one monomer per asymmetric unit. Structure determination using heavy-atom derivative crystals is in progress, along with an effort to crystallize the calcium ion bound form of the enzyme.

About this Structure

2POO is a Single protein structure of sequence from Bacillus amyloliquefaciens. Full crystallographic information is available from OCA.

Reference

Preliminary X-ray crystallographic analysis of a novel phytase from a Bacillus amyloliquefaciens strain., Ha NC, Kim YO, Oh TK, Oh BH, Acta Crystallogr D Biol Crystallogr. 1999 Mar;55(Pt 3):691-3. PMID:10089471

Page seeded by OCA on Mon Mar 31 04:38:48 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools