2qo3
From Proteopedia
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|PDB= 2qo3 |SIZE=350|CAPTION= <scene name='initialview01'>2qo3</scene>, resolution 2.59Å | |PDB= 2qo3 |SIZE=350|CAPTION= <scene name='initialview01'>2qo3</scene>, resolution 2.59Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, | + | |LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CER:(2S,+3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE'>CER</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Erythronolide_synthase Erythronolide synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.94 2.3.1.94] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Erythronolide_synthase Erythronolide synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.94 2.3.1.94] </span> |
|GENE= eryAII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1836 Saccharopolyspora erythraea]) | |GENE= eryAII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1836 Saccharopolyspora erythraea]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[2hg4|2HG4]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qo3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qo3 OCA], [http://www.ebi.ac.uk/pdbsum/2qo3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qo3 RCSB]</span> | ||
}} | }} | ||
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[[Category: Kim, C Y.]] | [[Category: Kim, C Y.]] | ||
[[Category: Tang, Y.]] | [[Category: Tang, Y.]] | ||
| - | [[Category: ACT]] | ||
| - | [[Category: CER]] | ||
| - | [[Category: CL]] | ||
[[Category: acyltransferase]] | [[Category: acyltransferase]] | ||
[[Category: ketosynthase]] | [[Category: ketosynthase]] | ||
[[Category: phosphopantetheine]] | [[Category: phosphopantetheine]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:51:18 2008'' |
Revision as of 01:51, 31 March 2008
| |||||||
| , resolution 2.59Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||
| Gene: | eryAII (Saccharopolyspora erythraea) | ||||||
| Activity: | Erythronolide synthase, with EC number 2.3.1.94 | ||||||
| Related: | 2HG4
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal Structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase
Overview
We report the 2.6 A X-ray crystal structure of a 190 kDa homodimeric fragment from module 3 of the 6-deoxyerthronolide B synthase covalently bound to the inhibitor cerulenin. The structure shows two well-organized interdomain linker regions in addition to the full-length ketosynthase (KS) and acyltransferase (AT) domains. Analysis of the substrate-binding site of the KS domain suggests that a loop region at the homodimer interface influences KS substrate specificity. We also describe a model for the interaction of the catalytic domains with the acyl carrier protein (ACP) domain. The ACP is proposed to dock within a deep cleft between the KS and AT domains, with interactions that span both the KS homodimer and AT domain. In conjunction with other recent data, our results provide atomic resolution pictures of several catalytically relevant protein interactions in this remarkable family of modular megasynthases.
About this Structure
2QO3 is a Single protein structure of sequence from Saccharopolyspora erythraea. Full crystallographic information is available from OCA.
Reference
Structural and mechanistic analysis of protein interactions in module 3 of the 6-deoxyerythronolide B synthase., Tang Y, Chen AY, Kim CY, Cane DE, Khosla C, Chem Biol. 2007 Aug;14(8):931-43. PMID:17719492
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