2qpp
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 2qpp |SIZE=350|CAPTION= <scene name='initialview01'>2qpp</scene>, resolution 2.610Å | |PDB= 2qpp |SIZE=350|CAPTION= <scene name='initialview01'>2qpp</scene>, resolution 2.610Å | ||
|SITE= <scene name='pdbsite=AC1:Hem+Binding+Site+For+Residue+A+300'>AC1</scene> and <scene name='pdbsite=AC2:Hem+Binding+Site+For+Residue+B+300'>AC2</scene> | |SITE= <scene name='pdbsite=AC1:Hem+Binding+Site+For+Residue+A+300'>AC1</scene> and <scene name='pdbsite=AC2:Hem+Binding+Site+For+Residue+B+300'>AC2</scene> | ||
| - | |LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene> | + | |LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span> |
|GENE= HMOX2, HO2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= HMOX2, HO2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00232 HemeO]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qpp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qpp OCA], [http://www.ebi.ac.uk/pdbsum/2qpp PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2qpp RCSB]</span> | ||
}} | }} | ||
| Line 29: | Line 31: | ||
[[Category: Jr., G N.Phillips.]] | [[Category: Jr., G N.Phillips.]] | ||
[[Category: Wesenberg, G E.]] | [[Category: Wesenberg, G E.]] | ||
| - | [[Category: HEM]] | ||
[[Category: center for eukaryotic structural genomic]] | [[Category: center for eukaryotic structural genomic]] | ||
[[Category: cesg]] | [[Category: cesg]] | ||
| Line 45: | Line 46: | ||
[[Category: structural genomics medical relevance]] | [[Category: structural genomics medical relevance]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:43:39 2008'' |
Revision as of 04:43, 26 March 2008
| |||||||
| , resolution 2.610Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | and | ||||||
| Ligands: | |||||||
| Gene: | HMOX2, HO2 (Homo sapiens) | ||||||
| Activity: | Heme oxygenase, with EC number 1.14.99.3 | ||||||
| Domains: | HemeO | ||||||
| Resources: | FirstGlance, OCA, PDBsum, JenaLib, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of human heme oxygenase-2 C127A (HO-2) with bound heme
Overview
Heme oxygenase (HO) catalyzes the first step in the heme degradation pathway. The crystal structures of apo- and heme-bound truncated human HO-2 reveal a primarily alpha-helical architecture similar to that of human HO-1 and other known HOs. Proper orientation of heme in HO-2 is required for the regioselective oxidation of the alpha-mesocarbon. This is accomplished by interactions within the heme binding pocket, which is made up of two helices. The iron coordinating residue, His(45), resides on the proximal helix. The distal helix contains highly conserved glycine residues that allow the helix to flex and interact with the bound heme. Tyr(154), Lys(199), and Arg(203) orient the heme through direct interactions with the heme propionates. The rearrangements of side chains in heme-bound HO-2 compared with apoHO-2 further elucidate HO-2 heme interactions.
About this Structure
2QPP is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Comparison of apo- and heme-bound crystal structures of a truncated human heme oxygenase-2., Bianchetti CM, Yi L, Ragsdale SW, Phillips GN Jr, J Biol Chem. 2007 Dec 28;282(52):37624-31. Epub 2007 Oct 26. PMID:17965015
Page seeded by OCA on Wed Mar 26 06:43:39 2008
Categories: Heme oxygenase | Homo sapiens | Single protein | Bianchetti, C M. | Bingman, C A. | Bitto, E. | CESG, Center for Eukaryotic Structural Genomics. | Jr., G N.Phillips. | Wesenberg, G E. | Center for eukaryotic structural genomic | Cesg | Endoplasmic reticulum | Ho-2 | Iron | Metal-binding | Microsome | Oxidoreductase | Polymorphism | Protein structure initiative | Psi | Structural genomics community request | Structural genomics medical relevance
