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From Proteopedia
(Difference between revisions)
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- | EspG secretion is key in understanding the virulence of ''mycobacterium tuberculosis''. The specificity of EspG binding affinity to its specific PE-PPE ligand have many contributing factors. The four different EspG proteins found in ''mycobacterium tuberculosis'' have different characteristics that influence binding, where EspG5 binds to the most PE-PPE proteins. | + | EspG secretion is key in understanding the virulence of ''mycobacterium tuberculosis''. The specificity of EspG binding affinity to its specific PE-PPE ligand have many contributing factors. The four different EspG proteins found in ''mycobacterium tuberculosis'' have different characteristics that influence binding, where EspG5 binds to the most PE-PPE proteins. Here EspG5 binds to PE25-PPE41 to be excreted in the ESAT-6 pathway. |
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
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=== Binding === | === Binding === | ||
Factors that influence binding of EspG and PE-PPE: | Factors that influence binding of EspG and PE-PPE: | ||
- | + | Electrostatics: | |
+ | There is a partially negative over all charge on the EspG5 protein. | ||
+ | |||
shape | shape | ||
ligand random coil | ligand random coil |
Revision as of 13:19, 24 March 2015
Binding Specificity of EspG Proteins to PE-PPE Proteins in mycobacterium tuberculosis
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ Ekiert DC, Cox JS. Structure of a PE-PPE-EspG complex from Mycobacterium tuberculosis reveals molecular specificity of ESX protein secretion. Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14758-63. doi:, 10.1073/pnas.1409345111. Epub 2014 Oct 1. PMID:25275011 doi:http://dx.doi.org/10.1073/pnas.1409345111