This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4qcb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
+
==Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA==
-
 
+
<StructureSection load='4qcb' size='340' side='right' caption='[[4qcb]], [[Resolution|resolution]] 2.89&Aring;' scene=''>
-
The entry 4qcb is ON HOLD until Nov 11 2016
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4qcb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QCB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QCB FirstGlance]. <br>
-
Authors: Schormann, N., Banerjee, S., Ricciardi, R., Chattopadhyay, D.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
 
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dof|4dof]], [[4dog|4dog]], [[4lzb|4lzb]], [[4qc9|4qc9]], [[4qca|4qca]]</td></tr>
-
Description: Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qcb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qcb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qcb RCSB], [http://www.ebi.ac.uk/pdbsum/4qcb PDBsum]</span></td></tr>
-
[[Category: Schormann, N]]
+
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity).
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Uracil-DNA glycosylase]]
[[Category: Banerjee, S]]
[[Category: Banerjee, S]]
-
[[Category: Ricciardi, R]]
 
[[Category: Chattopadhyay, D]]
[[Category: Chattopadhyay, D]]
 +
[[Category: Ricciardi, R]]
 +
[[Category: Schormann, N]]
 +
[[Category: A20]]
 +
[[Category: Component of processivity factor]]
 +
[[Category: Dna repair enzyme]]
 +
[[Category: Hydrolase-dna complex]]
 +
[[Category: Poxvirus]]

Revision as of 14:05, 10 June 2015

Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA

4qcb, resolution 2.89Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools