4yw6
From Proteopedia
(Difference between revisions)
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- | ''' | + | ==Structural Insight into Divalent Galactoside Binding to Pseudomonas aeruginosa lectin LecA== |
+ | <StructureSection load='4yw6' size='340' side='right' caption='[[4yw6]], [[Resolution|resolution]] 1.40Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4yw6]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YW6 FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=G0P:N-[(2S)-6-AMINO-1-OXO-1-(PYRROLIDIN-1-YL)HEXAN-2-YL]-4-(BETA-D-GALACTOPYRANOSYLOXY)BENZAMIDE'>G0P</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yw6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/4yw6 PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Multivalent galactosides inhibiting Pseudomonas aeruginosa biofilms may help control this problematic pathogen. To understand the binding mode of tetravalent glycopeptide dendrimer GalAG2 [(Gal-beta-OC6H4CO-Lys-Pro-Leu)4(Lys-Phe-Lys-Ile)2Lys-His-Ile-NH2] to its target lectin LecA, crystal structures of LecA complexes with divalent analog GalAG1 [(Gal-beta-OC6H4CO-Lys-Pro-Leu)2Lys-Phe-Lys-Ile-NH2] and related glucose-triazole linked bis-galactosides 3u3 [Gal-beta-O(CH2)n-(C2HN3)-4-Glc-beta-(C2HN3)-[beta-Glc-4-(N3HC2)]2-(CH2)n-O-beta- Gal (n = 1)] and 5u3 (n = 3) were obtained, revealing a chelate bound 3u3, cross-linked 5u3, and monovalently bound GalAG1. Nevertheless, a chelate bound model better explaining their strong LecA binding and the absence of lectin aggregation was obtained by modeling for all three ligands. A model of the chelate bound GalAG2.LecA complex was also obtained rationalizing its unusually tight LecA binding (KD = 2.5 nM) and aggregation by lectin cross-linking. The very weak biofilm inhibition with divalent LecA inhibitors suggests that lectin aggregation is necessary for biofilm inhibition by GalAG2, pointing to multivalent glycoclusters as a unique opportunity to control P. aeruginosa biofilms. | ||
- | + | Structural Insight into Multivalent Galactoside Binding to Pseudomonas aeruginosa Lectin LecA.,Visini R, Jin X, Bergmann M, Michaud G, Pertici F, Fu O, Pukin A, Branson TR, Thies-Weesie DM, Kemmink J, Gillon E, Imberty A, Stocker A, Darbre T, Pieters RJ, Reymond JL ACS Chem Biol. 2015 Aug 28. PMID:26295304<ref>PMID:26295304</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | + | <references/> | |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
+ | [[Category: Bergmann, M]] | ||
+ | [[Category: Darbre, T]] | ||
[[Category: Gillon, E]] | [[Category: Gillon, E]] | ||
- | [[Category: Bergmann, M]] | ||
[[Category: Imberty, A]] | [[Category: Imberty, A]] | ||
+ | [[Category: Jin, X]] | ||
+ | [[Category: Michaud, G]] | ||
+ | [[Category: Pieters, R]] | ||
+ | [[Category: Reymond, J L]] | ||
+ | [[Category: Stocker, A]] | ||
[[Category: Visini, R]] | [[Category: Visini, R]] | ||
- | [[Category: | + | [[Category: Galactoside]] |
- | [[Category: | + | [[Category: Lectin]] |
- | [[Category: | + | [[Category: Sugar binding protein]] |
- | + |
Revision as of 11:12, 9 September 2015
Structural Insight into Divalent Galactoside Binding to Pseudomonas aeruginosa lectin LecA
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Categories: Bergmann, M | Darbre, T | Gillon, E | Imberty, A | Jin, X | Michaud, G | Pieters, R | Reymond, J L | Stocker, A | Visini, R | Galactoside | Lectin | Sugar binding protein