Sandbox Reserved 966

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The Cys429 involved in the disulfide bond between the HC and the LC can't be shown here due to the condition for getting the crystal structure.
The Cys429 involved in the disulfide bond between the HC and the LC can't be shown here due to the condition for getting the crystal structure.
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*The light chain of Clostridium botulinum neurotoxin serotype A has 11 α-helices :
 
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**Helix 1 : <scene name='60/604485/H1/2'>H1</scene>
 
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**Helix 2 : <scene name='60/604485/H2/1'>H2</scene> (we can notice the kink formed by <scene name='60/604485/Thr101/1'>Thr101</scene>, who may interact with an H from the N of Gly104)
 
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**Helix 4 : <scene name='60/604485/H4/1'>H4</scene>
 
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**Helix 5 : <scene name='60/604485/H5/1'>H5</scene>
 
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**Helix 6 : <scene name='60/604485/H6/1'>H6</scene>
 
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**Helix 7 : <scene name='60/604485/H7/1'>H7</scene>
 
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**Helix 8 : <scene name='60/604485/H8/1'>H8</scene>
 
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**Helix 9 : <scene name='60/604485/H9/1'>H9</scene>
 
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**Helix 10 : <scene name='60/604485/H10/1'>H10</scene>
 
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**Helix 11 : <scene name='60/604485/H11/1'>H11</scene>
 
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**Helix 12 : <scene name='60/604485/H12/1'>H12</scene>
 
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* It also has three 3-10 helices :
 
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**Helix 3 : <scene name='60/604485/H3/2'>H3</scene>
 
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**Helix 13 : <scene name='60/604485/H13/1'>H13</scene>
 
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**Helix 14 : <scene name='60/604485/H14/1'>H14</scene>
 
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* There are several <scene name='60/604485/Sheets/1'>β sheets </scene> that are anti parallel except <scene name='60/604485/Sheets_parrallel/1'>this one.</scene>
 
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* An interesting structure is also a typical <scene name='60/604485/Betaturn/1'>β-turn</scene> : indeed the chain makes a sharp reversal by 180° within 4 residues, moreover Cα from the ''i'' residue and the Cα from the ''i+3'' residue are separated by less than 7 angstroms.
 
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The Cys429 involved in the disulfide bond between the HC and the LC can't be shown here due to the condition for getting the crystal structure.
 
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=== Mechanism ===
=== Mechanism ===

Revision as of 08:42, 18 July 2015

This Sandbox is Reserved from 15/11/2014, through 15/05/2015 for use in the course "Biomolecule" taught by Bruno Kieffer at the Strasbourg University. This reservation includes Sandbox Reserved 951 through Sandbox Reserved 975.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
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More help: Help:Editing

Structure of the "Clostridium botulinum" neurotoxin serotype A light chain with Zn2+ cofactor bound

BoNT/A-LC

Drag the structure with the mouse to rotate
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