2mze

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
+
{{Large structure}}
 +
==NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7)==
 +
<StructureSection load='2mze' size='340' side='right' caption='[[2mze]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2mze]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MZE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2MZE FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2y6d|2y6d]], [[2y6c|2y6c]], [[1mmp|1mmp]], [[1mmq|1mmq]], [[1mmr|1mmr]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MMP7, MPSL1, PUMP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Matrilysin Matrilysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.23 3.4.24.23] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2mze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mze OCA], [http://pdbe.org/2mze PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2mze RCSB], [http://www.ebi.ac.uk/pdbsum/2mze PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2mze ProSAT]</span></td></tr>
 +
</table>
 +
{{Large structure}}
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/MMP7_HUMAN MMP7_HUMAN]] Degrades casein, gelatins of types I, III, IV, and V, and fibronectin. Activates procollagenase.<ref>PMID:2550050</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Matrix metalloproteinase-7 (MMP-7) sheds signaling proteins from cell surfaces to activate bacterial killing, wound healing, and tumorigenesis. The mechanism targeting soluble MMP-7 to membranes has been investigated. Nuclear magnetic resonance structures of the zymogen, free and bound to membrane mimics without and with anionic lipid, reveal peripheral binding to bilayers through paramagnetic relaxation enhancements. Addition of cholesterol sulfate partially embeds the protease in the bilayer, restricts its diffusion, and tips the active site away from the bilayer. Its insertion of hydrophobic residues organizes the lipids, pushing the head groups and sterol sulfate outward toward the enzyme's positive charge on the periphery of the enlarged interface. Fluorescence probing demonstrates a similar mode of binding to plasma membranes and internalized vesicles of colon cancer cells. Binding of bilayered micelles induces allosteric activation and conformational change in the auto-inhibitory peptide and the adjacent scissile site, illustrating a potential intermediate in the activation of the zymogen.
-
The entry 2mze is ON HOLD until Paper Publication
+
Charge-Triggered Membrane Insertion of Matrix Metalloproteinase-7, Supporter of Innate Immunity and Tumors.,Prior SH, Fulcher YG, Koppisetti RK, Jurkevich A, Van Doren SR Structure. 2015 Nov 3;23(11):2099-110. doi: 10.1016/j.str.2015.08.013. Epub 2015 , Oct 1. PMID:26439767<ref>PMID:26439767</ref>
-
Authors: Prior, S.H., Fulcher, Y.G., Van Doren, S.R.
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
Description: NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7)
+
<div class="pdbe-citations 2mze" style="background-color:#fffaf0;"></div>
-
[[Category: Unreleased Structures]]
+
== References ==
-
[[Category: Fulcher, Y.G]]
+
<references/>
-
[[Category: Prior, S.H]]
+
__TOC__
-
[[Category: Van Doren, S.R]]
+
</StructureSection>
 +
[[Category: Human]]
 +
[[Category: Matrilysin]]
 +
[[Category: Doren, S R.Van]]
 +
[[Category: Fulcher, Y G]]
 +
[[Category: Prior, S H]]
 +
[[Category: Hydrolase]]
 +
[[Category: Metalloenzyme]]
 +
[[Category: Zymogen]]

Revision as of 13:43, 16 November 2017

Warning: this is a large structure, and loading might take a long time or not happen at all.

NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7)

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools