1qz5
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 1qz5 |SIZE=350|CAPTION= <scene name='initialview01'>1qz5</scene>, resolution 1.45Å | |PDB= 1qz5 |SIZE=350|CAPTION= <scene name='initialview01'>1qz5</scene>, resolution 1.45Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5'-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HIC:4-METHYL-HISTIDINE'>HIC</scene>, <scene name='pdbligand=KAB:KABIRAMIDE+C'>KAB</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1qz6|1QZ6]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qz5 OCA], [http://www.ebi.ac.uk/pdbsum/1qz5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1qz5 RCSB]</span> | ||
}} | }} | ||
| Line 28: | Line 31: | ||
[[Category: Rayment, I.]] | [[Category: Rayment, I.]] | ||
[[Category: Tanaka, J.]] | [[Category: Tanaka, J.]] | ||
| - | [[Category: ATP]] | ||
| - | [[Category: CA]] | ||
| - | [[Category: KAB]] | ||
[[Category: actin]] | [[Category: actin]] | ||
[[Category: kabiramide c]] | [[Category: kabiramide c]] | ||
| Line 36: | Line 36: | ||
[[Category: trisoxazole]] | [[Category: trisoxazole]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:21:01 2008'' |
Revision as of 20:21, 30 March 2008
| |||||||
| , resolution 1.45Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , | ||||||
| Related: | 1QZ6
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Structure of rabbit actin in complex with kabiramide C
Overview
Marine macrolide toxins of trisoxazole family target actin with high affinity and specificity and have promising pharmacological properties. We present X-ray structures of actin in complex with two members of this family, kabiramide C and jaspisamide A, at a resolution of 1.45 and 1.6 A, respectively. The structures reveal the absolute stereochemistry of these toxins and demonstrate that their trisoxazole ring interacts with actin subdomain 1 while the aliphatic side chain is inserted into the hydrophobic cavity between actin subdomains 1 and 3. The binding site is essentially the same as the one occupied by the actin-capping domain of the gelsolin superfamily of proteins. The structural evidence suggests that actin filament severing and capping by these toxins is also analogous to that of gelsolin. Consequently, these macrolides may be viewed as small molecule biomimetics of an entire class of actin-binding proteins.
About this Structure
1QZ5 is a Single protein structure of sequence from Oryctolagus cuniculus. Full crystallographic information is available from OCA.
Reference
Trisoxazole macrolide toxins mimic the binding of actin-capping proteins to actin., Klenchin VA, Allingham JS, King R, Tanaka J, Marriott G, Rayment I, Nat Struct Biol. 2003 Dec;10(12):1058-63. Epub 2003 Oct 26. PMID:14578936
Page seeded by OCA on Sun Mar 30 23:21:01 2008
