1rfq
From Proteopedia
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|PDB= 1rfq |SIZE=350|CAPTION= <scene name='initialview01'>1rfq</scene>, resolution 3.0Å | |PDB= 1rfq |SIZE=350|CAPTION= <scene name='initialview01'>1rfq</scene>, resolution 3.0Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= | + | |LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5'-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=LAR:LATRUNCULIN+A'>LAR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= ACTA1, ACTA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9986 Oryctolagus cuniculus]) | |GENE= ACTA1, ACTA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9986 Oryctolagus cuniculus]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1rdw|1RDW]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfq OCA], [http://www.ebi.ac.uk/pdbsum/1rfq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rfq RCSB]</span> | ||
}} | }} | ||
| Line 29: | Line 32: | ||
[[Category: Yarmola, E G.]] | [[Category: Yarmola, E G.]] | ||
[[Category: Yoshioka, C.]] | [[Category: Yoshioka, C.]] | ||
| - | [[Category: ATP]] | ||
| - | [[Category: LAR]] | ||
| - | [[Category: MG]] | ||
[[Category: anti-parallel dimer]] | [[Category: anti-parallel dimer]] | ||
[[Category: filament]] | [[Category: filament]] | ||
| Line 37: | Line 37: | ||
[[Category: polymerization]] | [[Category: polymerization]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:27:32 2008'' |
Revision as of 20:27, 30 March 2008
| |||||||
| , resolution 3.0Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||
| Gene: | ACTA1, ACTA (Oryctolagus cuniculus) | ||||||
| Related: | 1RDW
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Actin Crystal Dynamics: Structural Implications for F-actin Nucleation, Polymerization and Branching Mediated by the Anti-parallel Dimer
Overview
Actin filament nucleation, polymerization, and branching are crucial steps in many forms of cell motility, cell shape, and intracellular organelle movements in a wide range of organisms. Previous biochemical data suggests that an anti-parallel actin dimer can incorporate itself into growing filamentous actin (F-actin) and has a role in branching. Furthermore, it is a widespread belief that nucleation is spawned from an actin trimer complex. Here we present the structures of actin dimers and trimers in two tetragonal crystal systems P4(3)2(1)2 and P4(3). Both crystal systems formed by an induced condensation transformation of a previously reported orthorhombic crystal system P2(1)2(1)2(1). Comparison between the three crystal systems demonstrates the dynamics and flexibility of actin-actin interactions. The dimer and trimer actin rearrangements observed between the three crystal systems may provide insight to in vivo actin-actin interactions that occur during the nucleation, polymerization, and branching of F-actin.
About this Structure
1RFQ is a Single protein structure of sequence from Oryctolagus cuniculus. Full crystallographic information is available from OCA.
Reference
Actin crystal dynamics: structural implications for F-actin nucleation, polymerization, and branching mediated by the anti-parallel dimer., Reutzel R, Yoshioka C, Govindasamy L, Yarmola EG, Agbandje-McKenna M, Bubb MR, McKenna R, J Struct Biol. 2004 Jun;146(3):291-301. PMID:15099571
Page seeded by OCA on Sun Mar 30 23:27:32 2008
