2kym
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
+ | |||
==Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide== | ==Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide== | ||
<StructureSection load='2kym' size='340' side='right' caption='[[2kym]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | <StructureSection load='2kym' size='340' side='right' caption='[[2kym]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[2kym]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lodel Lodel]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KYM FirstGlance]. <br> | <table><tr><td colspan='2'>[[2kym]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lodel Lodel]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KYM FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LELG_04233 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=379508 LODEL])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LELG_04233 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=379508 LODEL])</td></tr> | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kym OCA], [http://pdbe.org/2kym PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kym RCSB], [http://www.ebi.ac.uk/pdbsum/2kym PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kym OCA], [http://pdbe.org/2kym PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kym RCSB], [http://www.ebi.ac.uk/pdbsum/2kym PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kym ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
Line 12: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/2kym_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/2kym_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kym ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
== References == | == References == |
Revision as of 07:58, 25 July 2018
Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide
|
Categories: Lodel | Davidson, A R | Gorelik, M | Muhandiram, R | Bem1p | Cdc42p-interacting | Scaffold | Sh3 domain | Sh3-ci | Signaling protein | Ste20p prr