2oym

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|PDB= 2oym |SIZE=350|CAPTION= <scene name='initialview01'>2oym</scene>, resolution 1.860&Aring;
|PDB= 2oym |SIZE=350|CAPTION= <scene name='initialview01'>2oym</scene>, resolution 1.860&Aring;
|SITE=
|SITE=
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|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> and <scene name='pdbligand=MNI:N-{[(2R,3R,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PYRROLIDIN-2-YL]METHYL}-4-(DIMETHYLAMINO)BENZAMIDE'>MNI</scene>
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|LIGAND= <scene name='pdbligand=MNI:N-{[(2R,3R,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PYRROLIDIN-2-YL]METHYL}-4-(DIMETHYLAMINO)BENZAMIDE'>MNI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Endoglycosylceramidase Endoglycosylceramidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.123 3.2.1.123]
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Endoglycosylceramidase Endoglycosylceramidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.123 3.2.1.123] </span>
|GENE=
|GENE=
 +
|DOMAIN=
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oym OCA], [http://www.ebi.ac.uk/pdbsum/2oym PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2oym RCSB]</span>
}}
}}
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[[Category: Caines, M E.C.]]
[[Category: Caines, M E.C.]]
[[Category: Strynadka, N C.J.]]
[[Category: Strynadka, N C.J.]]
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[[Category: MNI]]
 
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[[Category: NA]]
 
[[Category: (alpha/beta)8 (tim) barrel]]
[[Category: (alpha/beta)8 (tim) barrel]]
[[Category: hydrolase]]
[[Category: hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 15:35:46 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:25:17 2008''

Revision as of 01:25, 31 March 2008


PDB ID 2oym

Drag the structure with the mouse to rotate
, resolution 1.860Å
Ligands: ,
Activity: Endoglycosylceramidase, with EC number 3.2.1.123
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex


About this Structure

2OYM is a Single protein structure of sequence from Rhodococcus sp.. Full crystallographic information is available from OCA.

Reference

The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system., Caines ME, Hancock SM, Tarling CA, Wrodnigg TM, Stick RV, Stutz AE, Vasella A, Withers SG, Strynadka NC, Angew Chem Int Ed Engl. 2007;46(24):4474-6. PMID:17487923

Page seeded by OCA on Mon Mar 31 04:25:17 2008

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