This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

2lwa

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 22:32, 9 August 2018

Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide

Structural highlights

2lwa is a 3 chain structure with sequence from Influenza a virus (a/hong kong/1035/1998(h1n1)). Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:	2kxa
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[Q91IJ0_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore (By similarity).[RuleBase:RU003324][SAAS:SAAS013829_004_327643]

Publication Abstract from PubMed

The highly conserved first 23 residues of the influenza hemagglutinin HA2 subunit constitute the fusion domain, which plays a pivotal role in fusing viral and host-cell membranes. At neutral pH, this peptide adopts a tight helical hairpin wedge structure, stabilized by aliphatic hydrogen bonding and charge-dipole interactions. We demonstrate that at low pH, where the fusion process is triggered, the native peptide transiently visits activated states that are very similar to those sampled by a G8A mutant. This mutant retains a small fraction of helical hairpin conformation, in rapid equilibrium with at least two open structures. The exchange rate between the closed and open conformations of the wild-type fusion peptide is approximately 40 kHz, with a total open-state population of approximately 20%. Transitions to these activated states are likely to play a crucial role in formation of the fusion pore, an essential structure required in the final stage of membrane fusion.

pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR.,Lorieau JL, Louis JM, Schwieters CD, Bax A Proc Natl Acad Sci U S A. 2012 Nov 19. PMID:23169643^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Lorieau JL, Louis JM, Schwieters CD, Bax A. pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR. Proc Natl Acad Sci U S A. 2012 Nov 19. PMID:23169643 doi:http://dx.doi.org/10.1073/pnas.1213801109

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2lwa"

@@ Line 1: / Line 1: @@
 ==Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide==
 <StructureSection load='2lwa' size='340' side='right' caption='[[2lwa]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
@@ Line 4: / Line 5: @@
 <table><tr><td colspan='2'>[[2lwa]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Influenza_a_virus_(a/hong_kong/1035/1998(h1n1)) Influenza a virus (a/hong kong/1035/1998(h1n1))]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LWA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LWA FirstGlance]. <br>
 </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2kxa|2kxa]]</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lwa OCA], [http://pdbe.org/2lwa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lwa RCSB], [http://www.ebi.ac.uk/pdbsum/2lwa PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lwa OCA], [http://pdbe.org/2lwa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lwa RCSB], [http://www.ebi.ac.uk/pdbsum/2lwa PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lwa ProSAT]</span></td></tr>
 </table>
 == Function ==

2lwa

From Proteopedia

Revision as of 22:32, 9 August 2018

Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox