2c4d
From Proteopedia
(Difference between revisions)
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- | ==2.6A | + | |
+ | ==2.6A Crystal Structure of Psathyrella velutina Lectin in Complex with N-acetylglucosamine== | ||
<StructureSection load='2c4d' size='340' side='right' caption='[[2c4d]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='2c4d' size='340' side='right' caption='[[2c4d]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2c4d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2c4d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Psathyrella_velutina Psathyrella velutina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C4D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C4D FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bwm|2bwm]], [[2bwr|2bwr]], [[2c25|2c25]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bwm|2bwm]], [[2bwr|2bwr]], [[2c25|2c25]]</td></tr> | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c4d OCA], [http://pdbe.org/2c4d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c4d RCSB], [http://www.ebi.ac.uk/pdbsum/2c4d PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c4d OCA], [http://pdbe.org/2c4d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c4d RCSB], [http://www.ebi.ac.uk/pdbsum/2c4d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2c4d ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c4/2c4d_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c4/2c4d_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c4d ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Psathyrella velutina]] |
[[Category: Chazalet, V]] | [[Category: Chazalet, V]] | ||
[[Category: Cioci, G]] | [[Category: Cioci, G]] | ||
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[[Category: Lectin]] | [[Category: Lectin]] | ||
[[Category: N-acetylglucosamine]] | [[Category: N-acetylglucosamine]] | ||
- | [[Category: Psathyrella velutina]] |
Revision as of 08:49, 23 May 2018
2.6A Crystal Structure of Psathyrella velutina Lectin in Complex with N-acetylglucosamine
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