2cde
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| + | ==Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR== | ||
<StructureSection load='2cde' size='340' side='right' caption='[[2cde]], [[Resolution|resolution]] 3.50Å' scene=''> | <StructureSection load='2cde' size='340' side='right' caption='[[2cde]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2cde]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CDE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CDE FirstGlance]. <br> | <table><tr><td colspan='2'>[[2cde]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CDE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CDE FirstGlance]. <br> | ||
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1b88|1b88]], [[1bwm|1bwm]], [[1h5b|1h5b]], [[1hxm|1hxm]], [[1ktk|1ktk]], [[1l0y|1l0y]], [[1tvd|1tvd]], [[2axh|2axh]], [[2axj|2axj]], [[2cdf|2cdf]], [[2cdg|2cdg]], [[1ao7|1ao7]], [[1qrn|1qrn]], [[1qse|1qse]], [[1qsf|1qsf]], [[1bd2|1bd2]], [[1lp9|1lp9]], [[1mi5|1mi5]], [[2bnr|2bnr]], [[2bnu|2bnu]], [[1kgc|1kgc]], [[1fo0|1fo0]], [[1kj2|1kj2]], [[1nam|1nam]], [[2ckb|2ckb]], [[1g6r|1g6r]], [[2bnq|2bnq]], [[1mwa|1mwa]], [[1kb5|1kb5]], [[1nfd|1nfd]], [[1tcr|1tcr]], [[1fyt|1fyt]], [[1j8h|1j8h]], [[1d9k|1d9k]], [[1ymm|1ymm]], [[1ypz|1ypz]], [[1zt4|1zt4]], [[1z5l|1z5l]], [[1zhn|1zhn]], [[2akr|2akr]], [[1cd1|1cd1]], [[1u3h|1u3h]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1b88|1b88]], [[1bwm|1bwm]], [[1h5b|1h5b]], [[1hxm|1hxm]], [[1ktk|1ktk]], [[1l0y|1l0y]], [[1tvd|1tvd]], [[2axh|2axh]], [[2axj|2axj]], [[2cdf|2cdf]], [[2cdg|2cdg]], [[1ao7|1ao7]], [[1qrn|1qrn]], [[1qse|1qse]], [[1qsf|1qsf]], [[1bd2|1bd2]], [[1lp9|1lp9]], [[1mi5|1mi5]], [[2bnr|2bnr]], [[2bnu|2bnu]], [[1kgc|1kgc]], [[1fo0|1fo0]], [[1kj2|1kj2]], [[1nam|1nam]], [[2ckb|2ckb]], [[1g6r|1g6r]], [[2bnq|2bnq]], [[1mwa|1mwa]], [[1kb5|1kb5]], [[1nfd|1nfd]], [[1tcr|1tcr]], [[1fyt|1fyt]], [[1j8h|1j8h]], [[1d9k|1d9k]], [[1ymm|1ymm]], [[1ypz|1ypz]], [[1zt4|1zt4]], [[1z5l|1z5l]], [[1zhn|1zhn]], [[2akr|2akr]], [[1cd1|1cd1]], [[1u3h|1u3h]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cde OCA], [http://pdbe.org/2cde PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cde RCSB], [http://www.ebi.ac.uk/pdbsum/2cde PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cde OCA], [http://pdbe.org/2cde PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cde RCSB], [http://www.ebi.ac.uk/pdbsum/2cde PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cde ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cde_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cde_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cde ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
Revision as of 08:25, 23 May 2018
Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR
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