This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1zru
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==structure of the lactophage p2 receptor binding protein in complex with glycerol== | ==structure of the lactophage p2 receptor binding protein in complex with glycerol== | ||
<StructureSection load='1zru' size='340' side='right' caption='[[1zru]], [[Resolution|resolution]] 1.73Å' scene=''> | <StructureSection load='1zru' size='340' side='right' caption='[[1zru]], [[Resolution|resolution]] 1.73Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1zru]] is a 3 chain structure | + | <table><tr><td colspan='2'>[[1zru]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZRU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZRU FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bsd|2bsd]], [[2bse|2bse]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bsd|2bsd]], [[2bse|2bse]]</td></tr> | ||
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zru OCA], [http://pdbe.org/1zru PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zru RCSB], [http://www.ebi.ac.uk/pdbsum/1zru PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zru ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zru OCA], [http://pdbe.org/1zru PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zru RCSB], [http://www.ebi.ac.uk/pdbsum/1zru PDBsum]</span></td></tr> | + | |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 12: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zr/1zru_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zr/1zru_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zru ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 31: | Line 31: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Lactococcus lactis bacteriophage p2]] | ||
[[Category: Blangy, S]] | [[Category: Blangy, S]] | ||
[[Category: Cambillau, C]] | [[Category: Cambillau, C]] | ||
Revision as of 09:15, 2 May 2018
structure of the lactophage p2 receptor binding protein in complex with glycerol
| |||||||||||
Categories: Blangy, S | Cambillau, C | Desmyter, A | Haard, H de | Huyghe, C | Labrie, S | Moineau, S | SPINE, Structural Proteomics in Europe | Spinelli, S | Tegoni, M | Tremblay, D M | Domains: beta barrel | Beta barrel | Beta prism | Spine | Structural genomic | Structural proteomics in europe | Viral protein

