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2k6d
From Proteopedia
(Difference between revisions)
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==CIN85 Sh3-C domain in complex with ubiquitin== | ==CIN85 Sh3-C domain in complex with ubiquitin== | ||
<StructureSection load='2k6d' size='340' side='right' caption='[[2k6d]], [[NMR_Ensembles_of_Models | 8 NMR models]]' scene=''> | <StructureSection load='2k6d' size='340' side='right' caption='[[2k6d]], [[NMR_Ensembles_of_Models | 8 NMR models]]' scene=''> | ||
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<table><tr><td colspan='2'>[[2k6d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K6D FirstGlance]. <br> | <table><tr><td colspan='2'>[[2k6d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K6D FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SH3KBP1, CIN85 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SH3KBP1, CIN85 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k6d OCA], [http://pdbe.org/2k6d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k6d RCSB], [http://www.ebi.ac.uk/pdbsum/2k6d PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k6d OCA], [http://pdbe.org/2k6d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k6d RCSB], [http://www.ebi.ac.uk/pdbsum/2k6d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2k6d ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/2k6d_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/2k6d_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k6d ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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[[Category: Bezsonova, I]] | [[Category: Bezsonova, I]] | ||
[[Category: Forman-Kay, J]] | [[Category: Forman-Kay, J]] | ||
| + | [[Category: Alternative splicing]] | ||
[[Category: Apoptosis]] | [[Category: Apoptosis]] | ||
[[Category: Cell junction]] | [[Category: Cell junction]] | ||
[[Category: Cin85]] | [[Category: Cin85]] | ||
| + | [[Category: Coiled coil]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Cytoplasmic vesicle]] | [[Category: Cytoplasmic vesicle]] | ||
[[Category: Cytoskeleton]] | [[Category: Cytoskeleton]] | ||
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[[Category: Nucleus]] | [[Category: Nucleus]] | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
| + | [[Category: Polymorphism]] | ||
[[Category: Sh3 domain]] | [[Category: Sh3 domain]] | ||
[[Category: Sh3 domain-ubiquitin complex]] | [[Category: Sh3 domain-ubiquitin complex]] | ||
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[[Category: Synaptosome]] | [[Category: Synaptosome]] | ||
[[Category: Ubiquitin]] | [[Category: Ubiquitin]] | ||
| + | [[Category: Ubl conjugation]] | ||
Revision as of 07:29, 4 July 2018
CIN85 Sh3-C domain in complex with ubiquitin
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Categories: Human | Bezsonova, I | Forman-Kay, J | Alternative splicing | Apoptosis | Cell junction | Cin85 | Coiled coil | Cytoplasm | Cytoplasmic vesicle | Cytoskeleton | Endocytosis | Membrane | Nucleus | Phosphoprotein | Polymorphism | Sh3 domain | Sh3 domain-ubiquitin complex | Sh3-binding | Synapse | Synaptosome | Ubiquitin | Ubl conjugation
