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1ukb
From Proteopedia
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==Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with benzoate== | ==Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with benzoate== | ||
<StructureSection load='1ukb' size='340' side='right' caption='[[1ukb]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='1ukb' size='340' side='right' caption='[[1ukb]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CUMD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=294 "Bacillus fluorescens liquefaciens" Flugge 1886])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CUMD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=294 "Bacillus fluorescens liquefaciens" Flugge 1886])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2-hydroxymuconate-6-semialdehyde_hydrolase 2-hydroxymuconate-6-semialdehyde hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.7.1.9 3.7.1.9] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2-hydroxymuconate-6-semialdehyde_hydrolase 2-hydroxymuconate-6-semialdehyde hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.7.1.9 3.7.1.9] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ukb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ukb OCA], [http://pdbe.org/1ukb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ukb RCSB], [http://www.ebi.ac.uk/pdbsum/1ukb PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ukb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ukb OCA], [http://pdbe.org/1ukb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ukb RCSB], [http://www.ebi.ac.uk/pdbsum/1ukb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ukb ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uk/1ukb_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uk/1ukb_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ukb ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
Revision as of 07:29, 28 March 2018
Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with benzoate
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Categories: Bacillus fluorescens liquefaciens flugge 1886 | 2-hydroxymuconate-6-semialdehyde hydrolase | Fushinobu, S | Hidaka, M | Jun, S Y | Nojiri, H | Omori, T | Shoun, H | Wakagi, T | Yamane, H | Alpha/beta-hydrolase | Aromatic compound | Beta-ketolase | Cumene | Cumene degradation | Hydrolase | Isopropylbenzene | Meta-cleavage compound hydrolase | Pcb | Polychlorinated biphenyl degradation | Pseudomonas fluorescens ip01 | Substrate specificity

