NADP-dependent malic enzyme
From Proteopedia
(Difference between revisions)
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- | == | + | xml format |
- | <StructureSection load=' | + | Viruses |
- | Best example is | + | Eukaryota |
- | Molecule | + | Bacteria |
+ | == Lysozyme == | ||
+ | <StructureSection load='1swy' size='340' side='right' caption='The best structure for Lysozyme shown: 1swy' scene=''> | ||
+ | Best example is 1swy and is shown in the viewer.<br> | ||
+ | Molecule Lysozyme, also known as Lysozyme, CP-7 lysin, Muramidase, Endolysin, 1,4-beta-N-acetylmuramidase, Lysis protein, CP-1 lysin, Lysozyme murein hydrolase, Protein gp17, Transglycosylase, Hevamine-A, Chitinase and L-alanyl-D-glutamate peptidase. | ||
+ | == Function == | ||
==Catalytic Activity == | ==Catalytic Activity == | ||
Line 12: | Line 17: | ||
== Biological process == | == Biological process == | ||
Is involved in the following biological processes:<br> | Is involved in the following biological processes:<br> | ||
- | + | cell wall macromolecule catabolic process<br> | |
- | + | peptidoglycan catabolic process<br> | |
- | + | metabolic process<br> | |
- | response to | + | defense response to bacterium<br> |
+ | cytolysis<br> | ||
+ | viral release from host cell<br> | ||
carbohydrate metabolic process<br> | carbohydrate metabolic process<br> | ||
- | + | chitin catabolic process<br> | |
- | + | polysaccharide catabolic process<br> | |
- | + | cytolysis by virus of host cell<br> | |
- | + | cell wall organization<br> | |
- | + | ||
== In structures == | == In structures == | ||
- | + | Lysozyme is found in 595 PDB entries<br> | |
- | *<b> | + | *<b>Viruses</b> (578 PDB entries): <br> |
- | **<b> | + | **<b>Enterobacteria phage T4</b> (561 PDB entries): <br> |
- | ***[[ | + | ***[[1swy]] <div class="pdb-prints 1swy"></div> |
- | ***Title: | + | ***Title: Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination |
- | *** | + | ***1.06 A resolution |
- | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:% | + | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Enterobacteria%20phage%20T4%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] |
- | **<b> | + | **<b>Streptococcus phage Cp-1</b> (6 PDB entries): <br> |
- | ***[[ | + | ***[[2j8g]] <div class="pdb-prints 2j8g"></div> |
- | ***Title: | + | ***Title: Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a tetrasaccharide- pentapeptide) |
+ | ***1.69 A resolution | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Streptococcus%20phage%20Cp-1%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Enterobacteria phage lambda</b> (3 PDB entries): <br> | ||
+ | ***[[1am7]] <div class="pdb-prints 1am7"></div> | ||
+ | ***Title: Lysozyme from bacteriophage lambda | ||
+ | ***2.3 A resolution | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Enterobacteria%20phage%20lambda%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Enterobacteria phage P1</b> (2 PDB entries): <br> | ||
+ | ***[[1xju]] <div class="pdb-prints 1xju"></div> | ||
+ | ***Title: Crystal structure of secreted inactive form of P1 phage endolysin Lyz | ||
+ | ***1.07 A resolution | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Enterobacteria%20phage%20P1%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Streptococcus phage CP-7</b> (1 PDB entries): <br> | ||
+ | ***[[4cvd]] <div class="pdb-prints 4cvd"></div> | ||
+ | ***Title: Crystal structure of the central repeat of cell wall binding module of Cpl7 | ||
+ | ***1.666 A resolution | ||
+ | *<b>Eukaryota</b> (16 PDB entries): <br> | ||
+ | **<b>Hevea brasiliensis</b> (7 PDB entries): <br> | ||
+ | ***[[1kqy]] <div class="pdb-prints 1kqy"></div> | ||
+ | ***Title: Hevamine Mutant D125A/E127A/Y183F in Complex with Penta-NAG | ||
+ | ***1.92 A resolution | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Hevea%20brasiliensis%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Meretrix lusoria</b> (3 PDB entries): <br> | ||
+ | ***[[4pj2]] <div class="pdb-prints 4pj2"></div> | ||
+ | ***Title: Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme | ||
+ | ***1.24 A resolution | ||
+ | ***Other macromolecules also in this entry: Putative exported protein, . | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Meretrix%20lusoria%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Bombyx mori</b> (2 PDB entries): <br> | ||
+ | ***[[1gd6]] <div class="pdb-prints 1gd6"></div> | ||
+ | ***Title: STRUCTURE OF THE BOMBYX MORI LYSOZYME | ||
***2.5 A resolution | ***2.5 A resolution | ||
+ | ***[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific_name:%22Bombyx%20mori%22&all_molecule_names:%22Lysozyme%22&!chimera:y Search for other PDB entries] | ||
+ | **<b>Mus musculus</b> (1 PDB entries): <br> | ||
+ | ***[[1iak]] <div class="pdb-prints 1iak"></div> | ||
+ | ***Title: HISTOCOMPATIBILITY ANTIGEN I-AK | ||
+ | ***1.9 A resolution | ||
+ | ***Other macromolecules also in this entry: H-2 class II histocompatibility antigen, A-K beta chain, H-2 class II histocompatibility antigen, A-K alpha chain. | ||
+ | *<b>Bacteria</b> (1 PDB entries): <br> | ||
+ | **<b>Escherichia coli</b> (1 PDB entries): <br> | ||
+ | ***[[2qb0]] <div class="pdb-prints 2qb0"></div> | ||
+ | ***Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker. | ||
+ | ***2.56 A resolution | ||
+ | ***Other macromolecules also in this entry: Transcription factor ETV6, . | ||
+ | [[Category:Topic Page]][[Category:PDBe]] |
Revision as of 20:33, 12 September 2015
xml format Viruses Eukaryota Bacteria
Lysozyme
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