1zu8
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of the goat signalling protein with a bound trisaccharide reveals that Trp78 reduces the carbohydrate binding site to half== | ==Crystal structure of the goat signalling protein with a bound trisaccharide reveals that Trp78 reduces the carbohydrate binding site to half== | ||
<StructureSection load='1zu8' size='340' side='right' caption='[[1zu8]], [[Resolution|resolution]] 3.05Å' scene=''> | <StructureSection load='1zu8' size='340' side='right' caption='[[1zu8]], [[Resolution|resolution]] 3.05Å' scene=''> | ||
| Line 5: | Line 6: | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qzo|1qzo]], [[1syt|1syt]], [[1zbv|1zbv]], [[1zbw|1zbw]], [[1zu6|1zu6]], [[1zu7|1zu7]], [[1zu9|1zu9]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qzo|1qzo]], [[1syt|1syt]], [[1zbv|1zbv]], [[1zbw|1zbw]], [[1zu6|1zu6]], [[1zu7|1zu7]], [[1zu9|1zu9]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zu8 OCA], [http://pdbe.org/1zu8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zu8 RCSB], [http://www.ebi.ac.uk/pdbsum/1zu8 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zu8 OCA], [http://pdbe.org/1zu8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zu8 RCSB], [http://www.ebi.ac.uk/pdbsum/1zu8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zu8 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 13: | Line 14: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zu/1zu8_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zu/1zu8_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zu8 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Chitinase-3-like protein 1|Chitinase-3-like protein 1]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| Line 33: | Line 31: | ||
[[Category: Srivastava, D B]] | [[Category: Srivastava, D B]] | ||
[[Category: Complex trisaccharide]] | [[Category: Complex trisaccharide]] | ||
| - | [[Category: Crystal structure]] | ||
[[Category: Signaling protein]] | [[Category: Signaling protein]] | ||
[[Category: Signalling protein]] | [[Category: Signalling protein]] | ||
Revision as of 08:59, 2 May 2018
Crystal structure of the goat signalling protein with a bound trisaccharide reveals that Trp78 reduces the carbohydrate binding site to half
| |||||||||||
