This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2jhl
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Structure of globular heads of M-ficolin complexed with sialic acid== | ==Structure of globular heads of M-ficolin complexed with sialic acid== | ||
<StructureSection load='2jhl' size='340' side='right' caption='[[2jhl]], [[Resolution|resolution]] 1.75Å' scene=''> | <StructureSection load='2jhl' size='340' side='right' caption='[[2jhl]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
| Line 5: | Line 6: | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SLB:5-N-ACETYL-BETA-D-NEURAMINIC+ACID'>SLB</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SLB:5-N-ACETYL-BETA-D-NEURAMINIC+ACID'>SLB</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2jhh|2jhh]], [[2jhi|2jhi]], [[2jhk|2jhk]], [[2jhm|2jhm]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2jhh|2jhh]], [[2jhi|2jhi]], [[2jhk|2jhk]], [[2jhm|2jhm]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jhl OCA], [http://pdbe.org/2jhl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jhl RCSB], [http://www.ebi.ac.uk/pdbsum/2jhl PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jhl OCA], [http://pdbe.org/2jhl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jhl RCSB], [http://www.ebi.ac.uk/pdbsum/2jhl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2jhl ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 13: | Line 14: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jh/2jhl_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jh/2jhl_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jhl ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 49: | Line 50: | ||
[[Category: Innate immunity]] | [[Category: Innate immunity]] | ||
[[Category: Lectin]] | [[Category: Lectin]] | ||
| + | [[Category: Polymorphism]] | ||
| + | [[Category: Sugar binding protein]] | ||
[[Category: Sugar-binding protein]] | [[Category: Sugar-binding protein]] | ||
Revision as of 06:53, 11 July 2018
Structure of globular heads of M-ficolin complexed with sialic acid
| |||||||||||

