2k8b
From Proteopedia
(Difference between revisions)
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==Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin== | ==Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin== | ||
<StructureSection load='2k8b' size='340' side='right' caption='[[2k8b]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | <StructureSection load='2k8b' size='340' side='right' caption='[[2k8b]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | ||
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2k89|2k89]], [[2k8a|2k8a]], [[2k8c|2k8c]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2k89|2k89]], [[2k8a|2k8a]], [[2k8c|2k8c]]</td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), PLAA, PLAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), PLAA, PLAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k8b OCA], [http://pdbe.org/2k8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k8b RCSB], [http://www.ebi.ac.uk/pdbsum/2k8b PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k8b OCA], [http://pdbe.org/2k8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k8b RCSB], [http://www.ebi.ac.uk/pdbsum/2k8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2k8b ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k8/2k8b_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k8/2k8b_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k8b ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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[[Category: Lin, D H]] | [[Category: Lin, D H]] | ||
[[Category: Zhou, C J]] | [[Category: Zhou, C J]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Nucleus]] | [[Category: Nucleus]] | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
[[Category: Protein binding]] | [[Category: Protein binding]] | ||
[[Category: Ubiquitin in complex with pfuc cis isomer]] | [[Category: Ubiquitin in complex with pfuc cis isomer]] | ||
| + | [[Category: Ubl conjugation]] | ||
[[Category: Wd repeat]] | [[Category: Wd repeat]] | ||
Revision as of 11:16, 18 July 2018
Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin
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