2p3y
From Proteopedia
(Difference between revisions)
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==Crystal structure of VPA0735 from Vibrio parahaemolyticus. NorthEast Structural Genomics target VpR109== | ==Crystal structure of VPA0735 from Vibrio parahaemolyticus. NorthEast Structural Genomics target VpR109== | ||
<StructureSection load='2p3y' size='340' side='right' caption='[[2p3y]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2p3y' size='340' side='right' caption='[[2p3y]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0735 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0735 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p3y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3y OCA], [http://pdbe.org/2p3y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p3y RCSB], [http://www.ebi.ac.uk/pdbsum/2p3y PDBsum], [http://www.topsan.org/Proteins/NESGC/2p3y TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p3y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3y OCA], [http://pdbe.org/2p3y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p3y RCSB], [http://www.ebi.ac.uk/pdbsum/2p3y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3y ProSAT], [http://www.topsan.org/Proteins/NESGC/2p3y TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p3/2p3y_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p3/2p3y_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p3y ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
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[[Category: Hunt, J F]] | [[Category: Hunt, J F]] | ||
[[Category: Liu, J]] | [[Category: Liu, J]] | ||
| - | [[Category: Ma, L | + | [[Category: Ma, L C]] |
[[Category: Montelione, G T]] | [[Category: Montelione, G T]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
Revision as of 18:56, 24 January 2018
Crystal structure of VPA0735 from Vibrio parahaemolyticus. NorthEast Structural Genomics target VpR109
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Categories: Vibpa | Acton, T B | Baran, M C | Cunningham, K | Fang, Y | Forouhar, F | Hunt, J F | Liu, J | Ma, L C | Montelione, G T | Structural genomic | Neely, H | Rost, B | Seetharaman, J | Tong, L | Wang, D | Xia, R | Hypothetical protein | Nesg | PSI, Protein structure initiative | Unknown function
