Timothy Locksmith sandbox Heat Sock Factor
From Proteopedia
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== Sturcture/DNA Interaction == | == Sturcture/DNA Interaction == | ||
| - | HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus, <scene name='71/714949/Dimer_hsf_with_dna_interaction/3'>trimerizes</scene> (could only isloate a dimer structure), and then bind to the large Groove of the DNA to Heat shock elements throughout the genome.<ref>DOI 10.1126/science.8421783</ref> Specifically an <scene name='71/714949/Arg_met_interact/1'>Arginine, and Methionine</scene> from each of the monomer bind to <scene name='71/714949/Alternating_gaa/1'>three oppositely oriented</scene> "<scene name='71/714949/Gaa_met_arg_interact/2'>nGAAn</scene>" sections of the genome.<ref>PMID:10331875</ref> These residues interact with the nucleotide bases, while nearby residues interact with the back bone to stabilize the transcription factor in place. The structure is classified as a "winged" helix turn helix | + | HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus, <scene name='71/714949/Dimer_hsf_with_dna_interaction/3'>trimerizes</scene> (could only isloate a dimer structure), and then bind to the large Groove of the DNA to Heat shock elements throughout the genome.<ref>DOI: 10.1126/science.8421783</ref> Specifically an <scene name='71/714949/Arg_met_interact/1'>Arginine, and Methionine</scene> from each of the monomer bind to <scene name='71/714949/Alternating_gaa/1'>three oppositely oriented</scene> "<scene name='71/714949/Gaa_met_arg_interact/2'>nGAAn</scene>" sections of the genome.<ref>PMID:10331875</ref> These residues interact with the nucleotide bases, while nearby residues interact with the back bone to stabilize the transcription factor in place. The structure is classified as a "winged" helix turn helix |
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 18:09, 28 October 2015
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