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4usm
From Proteopedia
(Difference between revisions)
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| - | ''' | + | ==WcbL complex with glycerol bound to sugar site== |
| + | <StructureSection load='4usm' size='340' side='right' caption='[[4usm]], [[Resolution|resolution]] 1.82Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4usm]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4USM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4USM FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4usk|4usk]]</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-glycero-beta-D-manno-heptose-7-phosphate_kinase D-glycero-beta-D-manno-heptose-7-phosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.167 2.7.1.167] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4usm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4usm OCA], [http://pdbe.org/4usm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4usm RCSB], [http://www.ebi.ac.uk/pdbsum/4usm PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Gram-negative bacteria utilize heptoses as part of their repertoire of extracellular polysaccharide virulence determinants. Disruption of heptose biosynthesis offers an attractive target for novel antimicrobials. A critical step in the synthesis of heptoses is their 1-O phosphorylation, mediated by kinases such as HldE or WcbL. Here, we present the structure of WcbL from Burkholderia pseudomallei. We report that WcbL operates through a sequential ordered Bi-Bi mechanism, loading the heptose first and then ATP. We show that dimeric WcbL binds ATP anti-cooperatively in the absence of heptose, and cooperatively in its presence. Modeling of WcbL suggests that heptose binding causes an elegant switch in the hydrogen-bonding network, facilitating the binding of a second ATP molecule. Finally, we screened a library of drug-like fragments, identifying hits that potently inhibit WcbL. Our results provide a novel mechanism for control of substrate binding and emphasize WcbL as an attractive anti-microbial target for Gram-negative bacteria. | ||
| - | + | Unraveling the B. pseudomallei Heptokinase WcbL: From Structure to Drug Discovery.,Vivoli M, Isupov MN, Nicholas R, Hill A, Scott AE, Kosma P, Prior JL, Harmer NJ Chem Biol. 2015 Dec 17;22(12):1622-32. doi: 10.1016/j.chembiol.2015.10.015. PMID:26687481<ref>PMID:26687481</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | <div class="pdbe-citations 4usm" style="background-color:#fffaf0;"></div> | |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: D-glycero-beta-D-manno-heptose-7-phosphate kinase]] | ||
| + | [[Category: Harmer, N J]] | ||
[[Category: Hill, A]] | [[Category: Hill, A]] | ||
| + | [[Category: Isupov, M N]] | ||
| + | [[Category: Kosma, P]] | ||
[[Category: Nicholas, R]] | [[Category: Nicholas, R]] | ||
| - | [[Category: | + | [[Category: Prior, J]] |
| - | + | ||
[[Category: Scott, A]] | [[Category: Scott, A]] | ||
| - | [[Category: | + | [[Category: Vivoli, M]] |
| + | [[Category: Capsular polysaccharide]] | ||
| + | [[Category: Drug discovery]] | ||
| + | [[Category: Heptopyranose]] | ||
| + | [[Category: Transferase]] | ||
Revision as of 20:16, 13 January 2016
WcbL complex with glycerol bound to sugar site
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