Arabinanase

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Line 20: Line 20:
**[[2x8f]], [[1uv4]] – BsEndo-Ara – ''Bacillus subtilis''<br />
**[[2x8f]], [[1uv4]] – BsEndo-Ara – ''Bacillus subtilis''<br />
**[[2x8t]], [[4cot]] - BsEndo-Ara (mutant) <br />
**[[2x8t]], [[4cot]] - BsEndo-Ara (mutant) <br />
-
**[[3cu9]], [[1wl7]] – GsEndo-Ara – ''Geobacillus stearothermophilus''<br />
+
**[[3cu9]], [[1wl7]], [[5ho0]], [[5ho2]], [[5hp6]] – GsEndo-Ara – ''Geobacillus stearothermophilus''<br />
**[[3d5y]], [[3d60]] - GsEndo-Ara (mutant) <br />
**[[3d5y]], [[3d60]] - GsEndo-Ara (mutant) <br />
**[[1gyd]] – CcEndo-Ara – ''Cellvibrio cellulose''<br />
**[[1gyd]] – CcEndo-Ara – ''Cellvibrio cellulose''<br />
**[[1gyh]] - CcEndo-Ara (mutant)<br />
**[[1gyh]] - CcEndo-Ara (mutant)<br />
**[[4kc7]], [[4kc8]] - TpEndo-Ara – ''Thermotoga petrophila''<br />
**[[4kc7]], [[4kc8]] - TpEndo-Ara – ''Thermotoga petrophila''<br />
-
**[[4kca]] - Endo-Ara – bovine<br />
+
**[[4kca]], [[4kcb]] - Endo-Ara – bovine<br />
*Endo-arabinanase complex with substrate
*Endo-arabinanase complex with substrate
Line 31: Line 31:
**[[1gye]] - CcEndo-Ara (mutant) + arabinohexose<br />
**[[1gye]] - CcEndo-Ara (mutant) + arabinohexose<br />
**[[3d5z]], [[3d61]] - GsEndo-Ara (mutant) + arabinotriose<br />
**[[3d5z]], [[3d61]] - GsEndo-Ara (mutant) + arabinotriose<br />
 +
**[[5ho9]] - GsEndo-Ara + arabinooctaose<br />
 +
**[[5hof]] - GsEndo-Ara + pentaose<br />
 +
**[[5hon]] - GsEndo-Ara + arabinotriose<br />
**[[2x8s]] - BsEndo-Ara (mutant) + arabinotriose<br />
**[[2x8s]] - BsEndo-Ara (mutant) + arabinotriose<br />

Revision as of 10:44, 8 March 2017

Endo-arabinanase complex with arabinohexose (yellow) and Cl- ion (green) (PDB code 1gye)

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3D Structures of Arabinanase

Updated on 08-March-2017

References

  1. Alhassid A, Ben-David A, Tabachnikov O, Libster D, Naveh E, Zolotnitsky G, Shoham Y, Shoham G. Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate. Biochem J. 2009 Jul 29;422(1):73-82. PMID:19505290 doi:10.1042/BJ20090180
  2. Nurizzo D, Turkenburg JP, Charnock SJ, Roberts SM, Dodson EJ, McKie VA, Taylor EJ, Gilbert HJ, Davies GJ. Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold. Nat Struct Biol. 2002 Sep;9(9):665-8. PMID:12198486 doi:10.1038/nsb835

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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